./iterations/neb0_image02_iter21.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.360015547147 0.551421737441 0.413700832188} C1 1 1 14 {} {0.336680788665 0.5248055089 0.524294431413} Si1 2 1 14 {} {0.421695683828 0.562244388737 0.409307947344} Si2 3 1 8 {} {0.349870498603 0.5816016007 0.600342319134} O1 4 1 8 {} {0.281813254809 0.522999993315 0.51723114158} O2 5 1 6 {} {0.35564144343 0.439603363171 0.559061155501} C2 6 1 6 {} {0.452866539706 0.481994819977 0.394685952202} C3 7 1 8 {} {0.434606623605 0.5972243768 0.508225783941} O3 8 1 8 {} {0.4346988076 0.613654738045 0.32626477945} O4 9 1 14 {} {0.231306666668 0.527656100077 0.558584191667} Si3 10 1 7 {} {0.211666490936 0.44949962714 0.592813568924} N1 11 1 14 {} {0.189226484101 0.441176010017 0.700316711703} Si4 12 1 14 {} {0.21216986582 0.381806363348 0.517708011682} Si5 13 1 7 {} {0.206127258749 0.403146186924 0.407326576296} N2 14 1 7 {} {0.138773137778 0.480224168135 0.720433334646} N3 15 1 1 {} {0.350030934403 0.515699968203 0.361364710138} H1 16 1 1 {} {0.344431018846 0.599770656675 0.396651471348} H2 17 1 1 {} {0.37974800802 0.599950482505 0.590761619214} H3 18 1 1 {} {0.346917474449 0.401030878813 0.509698428601} H4 19 1 1 {} {0.339903206539 0.425782220071 0.622732649537} H5 20 1 1 {} {0.391960896309 0.438370294881 0.569028421559} H6 21 1 1 {} {0.488952292765 0.491575191971 0.391581551418} H7 22 1 1 {} {0.443299408871 0.4576798239 0.331686800883} H8 23 1 1 {} {0.4467024553 0.446416216642 0.449196205745} H9 24 1 1 {} {0.465373739943 0.61176479007 0.514377521948} H10 25 1 1 {} {0.466702474958 0.616110864658 0.315058276273} H11 26 1 1 {} {0.229642727606 0.571803833804 0.638780831937} H12 27 1 1 {} {0.202465965975 0.55574258282 0.486941658113} H13 28 1 1 {} {0.182529635068 0.368140723359 0.714497553018} H14 29 1 1 {} {0.22074290803 0.470413277775 0.766285518165} H15 30 1 1 {} {0.255430987325 0.345292914866 0.523502314213} H16 31 1 1 {} {0.174589424726 0.337221009289 0.544317215374} H17 32 1 1 {} {0.233122726171 0.417703045461 0.371249320744} H18 33 1 1 {} {0.178101470456 0.42647111401 0.385078199276} H19 34 1 1 {} {0.137993896171 0.529829743002 0.735386513089} H20 35 1 1 {} {0.11073409002 0.466465390854 0.686869418666} H21 36 1 6 {} {0.63078552138 0.641190057443 0.349336554852} C4 37 1 14 {} {0.58768809882 0.578689879433 0.386717833338} Si6 38 1 14 {} {0.62514302526 0.729657121277 0.385818027047} Si7 39 1 8 {} {0.537450905897 0.61452014179 0.381191594058} O5 40 1 8 {} {0.588385170917 0.514190870453 0.319542337934} O6 41 1 6 {} {0.598715524278 0.546750286062 0.50161752051} C5 42 1 6 {} {0.643336442976 0.746718447193 0.502995742926} C6 43 1 8 {} {0.570289482149 0.744475573352 0.374317631402} O7 44 1 8 {} {0.652943541031 0.779021435276 0.315991628079} O8 45 1 14 {} {0.58210212257 0.453780575776 0.246646451792} Si8 46 1 7 {} {0.594642771827 0.375814899231 0.289635658045} N4 47 1 14 {} {0.550949576148 0.319385140284 0.313007751585} Si9 48 1 14 {} {0.649118442825 0.350459133923 0.314951836626} Si10 49 1 7 {} {0.690215843874 0.396646896009 0.263796845984} N5 50 1 7 {} {0.527056033626 0.276295712575 0.226270325486} N6 51 1 1 {} {0.664183969725 0.622845664891 0.368096420731} H22 52 1 1 {} {0.630038398322 0.641987172398 0.275683561482} H23 53 1 1 {} {0.539844373468 0.663576695214 0.37647815818} H24 54 1 1 {} {0.630836831009 0.520199761366 0.504408691511} H25 55 1 1 {} {0.572610739436 0.511231494447 0.521994169561} H26 56 1 1 {} {0.599635121465 0.587305507799 0.551196678041} H27 57 1 1 {} {0.63807313085 0.799495610173 0.521200808087} H28 58 1 1 {} {0.678926438598 0.735321963437 0.51237882723} H29 59 1 1 {} {0.624347062378 0.71618624647 0.550766048869} H30 60 1 1 {} {0.559869021237 0.790359816903 0.371442446928} H31 61 1 1 {} {0.67083312377 0.814736890391 0.341070680043} H32 62 1 1 {} {0.534421563726 0.451864080516 0.21790923221} H33 63 1 1 {} {0.611334681669 0.469928528938 0.169105502051} H34 64 1 1 {} {0.570939930738 0.268683335874 0.374402632192} H35 65 1 1 {} {0.51414841102 0.357395187717 0.356532205709} H36 66 1 1 {} {0.658446321022 0.356522988918 0.412503920856} H37 67 1 1 {} {0.652995551252 0.278995635563 0.286848200343} H38 68 1 1 {} {0.703506778924 0.437421847123 0.294151140972} H39 69 1 1 {} {0.693188593894 0.399559080408 0.196459980716} H40 70 1 1 {} {0.504907676259 0.299517776534 0.185374681886} H41 71 1 1 {} {0.544477265607 0.24091079916 0.192366973153} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end