./iterations/neb0_image02_iter4.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.359985090906 0.551475079551 0.413653628206} C1 1 1 14 {} {0.33669922628 0.524822707817 0.524369222633} Si1 2 1 14 {} {0.421660115541 0.562296671915 0.409265104687} Si2 3 1 8 {} {0.349854683251 0.58157632016 0.600359636282} O1 4 1 8 {} {0.281723656316 0.522946714169 0.517398253692} O2 5 1 6 {} {0.355648530827 0.439616708129 0.559048578092} C2 6 1 6 {} {0.452887633089 0.482079181 0.394579496172} C3 7 1 8 {} {0.434581488256 0.597294938926 0.508129281748} O3 8 1 8 {} {0.434667766989 0.6136624078 0.326138504582} O4 9 1 14 {} {0.2313096898 0.527559146836 0.558622965796} Si3 10 1 7 {} {0.211615151351 0.44946753393 0.59279501583} N1 11 1 14 {} {0.189171536778 0.441167482897 0.70024733399} Si4 12 1 14 {} {0.212169767113 0.381781299807 0.517752410585} Si5 13 1 7 {} {0.206112194294 0.403182087531 0.407411635777} N2 14 1 7 {} {0.138727201434 0.480232894197 0.720318462238} N3 15 1 1 {} {0.349979813757 0.515730278935 0.361355737713} H1 16 1 1 {} {0.34436658506 0.599817893923 0.396657491754} H2 17 1 1 {} {0.379715044466 0.599996538613 0.590747359795} H3 18 1 1 {} {0.346922379154 0.401033336639 0.509707736193} H4 19 1 1 {} {0.339931986448 0.425817930612 0.622758637129} H5 20 1 1 {} {0.391977364704 0.43840291019 0.56901946143} H6 21 1 1 {} {0.488961287841 0.491688920678 0.391430166112} H7 22 1 1 {} {0.443295014665 0.457802955972 0.33158513103} H8 23 1 1 {} {0.446755125157 0.446508244932 0.449082216542} H9 24 1 1 {} {0.465327158212 0.611890620888 0.514340933212} H10 25 1 1 {} {0.466648516865 0.616460113806 0.314822541847} H11 26 1 1 {} {0.229578452992 0.571778418669 0.638895901511} H12 27 1 1 {} {0.20244154417 0.555711803233 0.486983784831} H13 28 1 1 {} {0.182446743403 0.368100822971 0.714518066346} H14 29 1 1 {} {0.220700646727 0.470383546423 0.76626747988} H15 30 1 1 {} {0.255481943424 0.345275503815 0.523564415071} H16 31 1 1 {} {0.174597090453 0.337089991859 0.544318736879} H17 32 1 1 {} {0.233111355695 0.417628009608 0.371224958082} H18 33 1 1 {} {0.178074492116 0.426365384269 0.385092371095} H19 34 1 1 {} {0.137952113876 0.52982101075 0.735412628657} H20 35 1 1 {} {0.110681088401 0.466481387953 0.686826217645} H21 36 1 6 {} {0.630831515892 0.641185739849 0.349324262152} C4 37 1 14 {} {0.587752620978 0.578678042678 0.386748449769} Si6 38 1 14 {} {0.625169837928 0.72969190109 0.385822589488} Si7 39 1 8 {} {0.53745021828 0.614360401635 0.381304825881} O5 40 1 8 {} {0.588498982804 0.514202917475 0.319631579174} O6 41 1 6 {} {0.598787748091 0.546727202955 0.501612203496} C5 42 1 6 {} {0.643337406368 0.746735652964 0.503015094218} C6 43 1 8 {} {0.570335209367 0.744509852857 0.374275127417} O7 44 1 8 {} {0.653034223307 0.778989876594 0.315998096049} O8 45 1 14 {} {0.582110914903 0.453799617863 0.246693498831} Si8 46 1 7 {} {0.594600602062 0.375746892732 0.289708620322} N4 47 1 14 {} {0.550974680875 0.319400843682 0.313117551541} Si9 48 1 14 {} {0.649153327978 0.350392467639 0.314960038882} Si10 49 1 7 {} {0.690263137663 0.396510178129 0.263841404339} N5 50 1 7 {} {0.52697751115 0.276226417913 0.226335562502} N6 51 1 1 {} {0.664230208207 0.622865100717 0.36811172921} H22 52 1 1 {} {0.630089981831 0.64199480875 0.275679285505} H23 53 1 1 {} {0.5397195985 0.663388518779 0.376389288322} H24 54 1 1 {} {0.630902519684 0.520165993207 0.504314054774} H25 55 1 1 {} {0.572693518524 0.511183005854 0.521959255891} H26 56 1 1 {} {0.599708009424 0.587251021282 0.551234283183} H27 57 1 1 {} {0.638075169706 0.799518825699 0.521213472269} H28 58 1 1 {} {0.678930107351 0.735345306903 0.512412297589} H29 59 1 1 {} {0.624356057834 0.71618814016 0.550794255674} H30 60 1 1 {} {0.559903951515 0.79037975135 0.371425458879} H31 61 1 1 {} {0.670867718668 0.814758552699 0.34110465084} H32 62 1 1 {} {0.534456649776 0.451910035426 0.217993372616} H33 63 1 1 {} {0.611315099787 0.469888082042 0.169211329796} H34 64 1 1 {} {0.570950591429 0.268726895355 0.374409074678} H35 65 1 1 {} {0.514242358989 0.357400565941 0.356466106262} H36 66 1 1 {} {0.658448591741 0.356447894162 0.412462596804} H37 67 1 1 {} {0.652941094186 0.278961595172 0.28688478517} H38 68 1 1 {} {0.703435468473 0.437378049882 0.294143608075} H39 69 1 1 {} {0.693196365867 0.399550504691 0.196487322226} H40 70 1 1 {} {0.504923227022 0.299626958617 0.185345456701} H41 71 1 1 {} {0.544498616699 0.240901840789 0.192419532113} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end