./iterations/neb0_image03_iter4.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.361865827662 0.556252837552 0.413263731305} C1 1 1 14 {} {0.338616418171 0.529609545402 0.523950081215} Si1 2 1 14 {} {0.423595021589 0.567039080312 0.408829982787} Si2 3 1 8 {} {0.351732401463 0.586347309589 0.599972814379} O1 4 1 8 {} {0.2835885872 0.527750205925 0.517015091749} O2 5 1 6 {} {0.357531820337 0.444395696656 0.558655111344} C2 6 1 6 {} {0.454780896401 0.486813094406 0.394191083191} C3 7 1 8 {} {0.436460160101 0.602089143652 0.507770820343} O3 8 1 8 {} {0.436522122909 0.618503556663 0.325713797725} O4 9 1 14 {} {0.233206863056 0.532362416121 0.558232217952} Si3 10 1 7 {} {0.213497341792 0.454240203811 0.592404901373} N1 11 1 14 {} {0.191058298218 0.445935699286 0.699868979801} Si4 12 1 14 {} {0.214074408661 0.386531612285 0.517341634458} Si5 13 1 7 {} {0.207998000856 0.407949456348 0.40701810892} N2 14 1 7 {} {0.140611963802 0.485020491039 0.719920071611} N3 15 1 1 {} {0.351869368871 0.52050569852 0.360960848758} H1 16 1 1 {} {0.346253921874 0.60459390688 0.396263402067} H2 17 1 1 {} {0.381602613617 0.604770804922 0.590348083164} H3 18 1 1 {} {0.348812401685 0.405806615854 0.50931682818} H4 19 1 1 {} {0.341820076121 0.430590268949 0.622368279613} H5 20 1 1 {} {0.393862472876 0.443177801439 0.568624515389} H6 21 1 1 {} {0.4908068501 0.49646455856 0.391036770695} H7 22 1 1 {} {0.445176291067 0.462568943653 0.331191528214} H8 23 1 1 {} {0.448632212071 0.451273741202 0.448688280181} H9 24 1 1 {} {0.467212228688 0.616632612988 0.513932453519} H10 25 1 1 {} {0.468511760019 0.621144523971 0.314435652175} H11 26 1 1 {} {0.231463367708 0.576551383829 0.638505043906} H12 27 1 1 {} {0.204325183028 0.560485206482 0.486593709256} H13 28 1 1 {} {0.184332261004 0.37287778247 0.714124751765} H14 29 1 1 {} {0.222589498171 0.47515916297 0.765870326498} H15 30 1 1 {} {0.257368373942 0.350052654526 0.523173934665} H16 31 1 1 {} {0.176484998935 0.341866844763 0.543924007776} H17 32 1 1 {} {0.2350013258 0.422401289811 0.370827891289} H18 33 1 1 {} {0.179960352224 0.431140607608 0.384696584783} H19 34 1 1 {} {0.139839836304 0.534604843802 0.735022377871} H20 35 1 1 {} {0.112565907331 0.471254860916 0.686429784012} H21 36 1 6 {} {0.628940678853 0.636426362135 0.349712568069} C4 37 1 14 {} {0.585921274496 0.573850582238 0.387133665206} Si6 38 1 14 {} {0.62330840257 0.724921554537 0.386215604153} Si7 39 1 8 {} {0.53557950804 0.609687383514 0.381702094588} O5 40 1 8 {} {0.586617048985 0.509455923062 0.320044325938} O6 41 1 6 {} {0.596889620621 0.54196541763 0.502006576776} C5 42 1 6 {} {0.641443372964 0.741960316356 0.50341668439} C6 43 1 8 {} {0.56843264841 0.739734139574 0.374668218428} O7 44 1 8 {} {0.651146328343 0.774207160295 0.31639661604} O8 45 1 14 {} {0.580214155409 0.448988220579 0.24711817371} Si8 46 1 7 {} {0.592723087017 0.37097885879 0.290106044695} N4 47 1 14 {} {0.549090499439 0.314597102775 0.313459294821} Si9 48 1 14 {} {0.647254564115 0.345612377909 0.315354451579} Si10 49 1 7 {} {0.68837523218 0.39172950347 0.26423326877} N5 50 1 7 {} {0.525092685928 0.271461366164 0.226747094726} N6 51 1 1 {} {0.662339931768 0.61808781035 0.3685055344} H22 52 1 1 {} {0.628201032901 0.637218150663 0.276072225822} H23 53 1 1 {} {0.53787418654 0.65864712862 0.376804559702} H24 54 1 1 {} {0.629014034474 0.515393059166 0.504700944393} H25 55 1 1 {} {0.570802837709 0.506409228564 0.522351255885} H26 56 1 1 {} {0.597819123649 0.582475714442 0.551631343859} H27 57 1 1 {} {0.636186665243 0.794742705291 0.521606133234} H28 58 1 1 {} {0.67703746364 0.730568775484 0.512804570746} H29 59 1 1 {} {0.622467876927 0.711411524873 0.551188773373} H30 60 1 1 {} {0.558011862457 0.785605654341 0.371817243976} H31 61 1 1 {} {0.668979207311 0.809981217066 0.341495188474} H32 62 1 1 {} {0.532571932989 0.44713801915 0.218385919598} H33 63 1 1 {} {0.609428156199 0.465115164462 0.16960788943} H34 64 1 1 {} {0.56906324333 0.26395249755 0.374804350784} H35 65 1 1 {} {0.512351183424 0.352633164934 0.356863726588} H36 66 1 1 {} {0.656560979709 0.351672382215 0.412854986451} H37 67 1 1 {} {0.651052886687 0.274184294285 0.287277892146} H38 68 1 1 {} {0.70154594222 0.432600566362 0.294535862308} H39 69 1 1 {} {0.691305832163 0.394775369081 0.196881610068} H40 70 1 1 {} {0.503039246788 0.294849819966 0.185744827724} H41 71 1 1 {} {0.542608156884 0.236133271882 0.192818619622} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end