./iterations/neb0_image03_iter43.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.361900333254 0.556201544952 0.41321119423} C1 1 1 14 {} {0.338543312634 0.529748369438 0.523870983949} Si1 2 1 14 {} {0.423485546649 0.566800078624 0.409030928741} Si2 3 1 8 {} {0.35182087996 0.58648723329 0.599908213444} O1 4 1 8 {} {0.283663389485 0.528424407433 0.516676474155} O2 5 1 6 {} {0.357441487473 0.444461991851 0.558611003232} C2 6 1 6 {} {0.454516730236 0.486336028878 0.394327606942} C3 7 1 8 {} {0.436516683255 0.601696143166 0.507997840146} O3 8 1 8 {} {0.436511577787 0.6183385552 0.326061524775} O4 9 1 14 {} {0.233223107241 0.532659514096 0.558171600458} Si3 10 1 7 {} {0.213701212161 0.454546391988 0.592284400154} N1 11 1 14 {} {0.191206931633 0.446193020391 0.699742368703} Si4 12 1 14 {} {0.214134531004 0.386798998946 0.517138159356} Si5 13 1 7 {} {0.208068551675 0.407861156667 0.406691744717} N2 14 1 7 {} {0.140786115056 0.485214959885 0.720036183977} N3 15 1 1 {} {0.351955631613 0.520435946062 0.360869098468} H1 16 1 1 {} {0.346397232773 0.604624169201 0.396109603469} H2 17 1 1 {} {0.381719946928 0.60474566869 0.590391423298} H3 18 1 1 {} {0.348788823315 0.405872865435 0.509257158356} H4 19 1 1 {} {0.341711836344 0.430612021328 0.622285725503} H5 20 1 1 {} {0.393756437704 0.443246165827 0.568661400098} H6 21 1 1 {} {0.490564904431 0.495888812214 0.391435831865} H7 22 1 1 {} {0.444965482134 0.461965152303 0.331366097911} H8 23 1 1 {} {0.448188043527 0.450964115948 0.448962799892} H9 24 1 1 {} {0.467410910357 0.615661395487 0.513899380437} H10 25 1 1 {} {0.468502338774 0.619080639367 0.314130523321} H11 26 1 1 {} {0.231551493661 0.576862189306 0.638482578994} H12 27 1 1 {} {0.204277553534 0.5607228514 0.486546036774} H13 28 1 1 {} {0.184508961207 0.373112276785 0.714057933143} H14 29 1 1 {} {0.222771917747 0.475350355132 0.765836412028} H15 30 1 1 {} {0.257390358667 0.350121417744 0.523027806941} H16 31 1 1 {} {0.176499976503 0.342289932617 0.543884062272} H17 32 1 1 {} {0.235069131128 0.422646691685 0.370800708705} H18 33 1 1 {} {0.180090547415 0.431429321522 0.38468208262} H19 34 1 1 {} {0.1399813818 0.534834427729 0.734911991007} H20 35 1 1 {} {0.112733250038 0.471377035425 0.686578540831} H21 36 1 6 {} {0.629066778336 0.636357561154 0.349688923429} C4 37 1 14 {} {0.58592729976 0.574046580607 0.387164761917} Si6 38 1 14 {} {0.62333067164 0.724866777317 0.386232659008} Si7 39 1 8 {} {0.536087144946 0.611029279443 0.381682589043} O5 40 1 8 {} {0.586307136787 0.509502845875 0.319988901585} O6 41 1 6 {} {0.596681083804 0.542009616735 0.502076801905} C5 42 1 6 {} {0.641377819035 0.741817076084 0.503462327863} C6 43 1 8 {} {0.568453350269 0.739708145405 0.374862098228} O7 44 1 8 {} {0.650995785341 0.774213916036 0.316305287717} O8 45 1 14 {} {0.580107838215 0.449031478131 0.24719924909} Si8 46 1 7 {} {0.592682622531 0.37089280809 0.290263575731} N4 47 1 14 {} {0.549081081408 0.314551139086 0.313585353815} Si9 48 1 14 {} {0.647250578934 0.345610248969 0.315401718817} Si10 49 1 7 {} {0.688227252253 0.39185119066 0.26415936816} N5 50 1 7 {} {0.525213145912 0.271489159774 0.226446780095} N6 51 1 1 {} {0.662496460839 0.618075254219 0.368262110561} H22 52 1 1 {} {0.628119393728 0.637128627075 0.276055132935} H23 53 1 1 {} {0.539116905297 0.660087241023 0.377333512012} H24 54 1 1 {} {0.628756429322 0.515357100881 0.505131532419} H25 55 1 1 {} {0.570492816035 0.506581473673 0.522290068345} H26 56 1 1 {} {0.597538290421 0.582592322734 0.551615108934} H27 57 1 1 {} {0.636120724222 0.794596893695 0.521660868465} H28 58 1 1 {} {0.676958055528 0.730373873265 0.512869025705} H29 59 1 1 {} {0.622357509388 0.711260439805 0.551160857461} H30 60 1 1 {} {0.557797523357 0.78544881299 0.371844579399} H31 61 1 1 {} {0.668907609258 0.809937457243 0.341330245467} H32 62 1 1 {} {0.532515523522 0.446905720693 0.218338799217} H33 63 1 1 {} {0.609357607741 0.465065357609 0.169750485176} H34 64 1 1 {} {0.568991226254 0.263787117566 0.374732975836} H35 65 1 1 {} {0.512259035293 0.352409292723 0.356801401353} H36 66 1 1 {} {0.656532975631 0.351719217074 0.412903578556} H37 67 1 1 {} {0.651121008368 0.27419897167 0.287261343468} H38 68 1 1 {} {0.701654496015 0.432540168366 0.294513001231} H39 69 1 1 {} {0.691212736877 0.394756139631 0.196817886111} H40 70 1 1 {} {0.502879233769 0.294573931658 0.185772562424} H41 71 1 1 {} {0.542590633106 0.235951210305 0.192648724865} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end