./iterations/neb0_image04_iter15.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.363864657317 0.561046847532 0.412919815361} C1 1 1 14 {} {0.340623878039 0.534476558069 0.5235489879} Si1 2 1 14 {} {0.425479497436 0.571771638521 0.408459029514} Si2 3 1 8 {} {0.353638897028 0.591171839799 0.599493069145} O1 4 1 8 {} {0.285422967332 0.53260640837 0.516558408704} O2 5 1 6 {} {0.35941164469 0.44923411362 0.558217993253} C2 6 1 6 {} {0.456448444921 0.491227930775 0.393844378999} C3 7 1 8 {} {0.438305199913 0.606917913367 0.507410219331} O3 8 1 8 {} {0.438127331451 0.623631054787 0.325412562303} O4 9 1 14 {} {0.235204715845 0.537203072073 0.55772093337} Si3 10 1 7 {} {0.215430622114 0.459089079896 0.592002228817} N1 11 1 14 {} {0.192972254009 0.450828629942 0.69944393446} Si4 12 1 14 {} {0.215984634355 0.391449413684 0.51694252972} Si5 13 1 7 {} {0.209892127006 0.412657495638 0.406491040865} N2 14 1 7 {} {0.142519248667 0.489830657623 0.719647002869} N3 15 1 1 {} {0.353811396388 0.525343642079 0.360559651983} H1 16 1 1 {} {0.348215912142 0.609406247254 0.395856647659} H2 17 1 1 {} {0.383516555744 0.609566363421 0.589922480382} H3 18 1 1 {} {0.350725672084 0.410632757901 0.508933851559} H4 19 1 1 {} {0.34370931093 0.435410342611 0.621938035328} H5 20 1 1 {} {0.395771615093 0.447991450555 0.568215054827} H6 21 1 1 {} {0.492463344967 0.501111442897 0.390716006679} H7 22 1 1 {} {0.446946944135 0.467117297832 0.330699662769} H8 23 1 1 {} {0.450318432801 0.455778129866 0.448520494688} H9 24 1 1 {} {0.469150155387 0.621093743044 0.513525773949} H10 25 1 1 {} {0.470137096971 0.624928489026 0.313880447417} H11 26 1 1 {} {0.233408613442 0.581403165768 0.638013837501} H12 27 1 1 {} {0.206255820039 0.565351114107 0.486159640027} H13 28 1 1 {} {0.186290796003 0.377753549831 0.71370686485} H14 29 1 1 {} {0.22450215439 0.479997765517 0.765455107932} H15 30 1 1 {} {0.259245624975 0.354895538269 0.522726594824} H16 31 1 1 {} {0.17841111025 0.346783961999 0.543519536497} H17 32 1 1 {} {0.23690860654 0.427283042126 0.370464221565} H18 33 1 1 {} {0.181915849307 0.436019817363 0.384322195191} H19 34 1 1 {} {0.141776900825 0.539461880306 0.73459448294} H20 35 1 1 {} {0.114511283054 0.476096421661 0.686045568754} H21 36 1 6 {} {0.627086905312 0.631635376846 0.350106102045} C4 37 1 14 {} {0.584172634767 0.569118147081 0.387558115756} Si6 38 1 14 {} {0.621389703449 0.720083822258 0.386616860867} Si7 39 1 8 {} {0.534216270196 0.605625478478 0.38213855782} O5 40 1 8 {} {0.584692567536 0.504696811633 0.320414220232} O6 41 1 6 {} {0.594966470659 0.537134595897 0.502487173491} C5 42 1 6 {} {0.639534553105 0.737135470165 0.503823109712} C6 43 1 8 {} {0.566528892847 0.734882661195 0.375120845433} O7 44 1 8 {} {0.649177364075 0.769431181079 0.316757605703} O8 45 1 14 {} {0.578241715312 0.444207755584 0.247425467504} Si8 46 1 7 {} {0.590805990826 0.366148104908 0.290452935149} N4 47 1 14 {} {0.547172782304 0.309826328428 0.314122923846} Si9 48 1 14 {} {0.64538195335 0.34077601514 0.315758625617} Si10 49 1 7 {} {0.686419790083 0.387000518678 0.264606788466} N5 50 1 7 {} {0.523277938175 0.266741518237 0.227122219032} N6 51 1 1 {} {0.660446859668 0.613255314283 0.368868423751} H22 52 1 1 {} {0.626270339105 0.632377440862 0.276441915321} H23 53 1 1 {} {0.536666176661 0.654749462242 0.3774798704} H24 54 1 1 {} {0.627070069706 0.510592401199 0.505158027514} H25 55 1 1 {} {0.568834400837 0.501628944007 0.522740705637} H26 56 1 1 {} {0.595877976361 0.577669141581 0.552023942393} H27 57 1 1 {} {0.634269112294 0.789898677236 0.521998912159} H28 58 1 1 {} {0.675125181576 0.725726280804 0.513193746572} H29 59 1 1 {} {0.620552607414 0.706584297225 0.55157030583} H30 60 1 1 {} {0.55607680465 0.780713639801 0.372208132292} H31 61 1 1 {} {0.667054337133 0.805145109987 0.341838908316} H32 62 1 1 {} {0.530604395085 0.442270116847 0.218726188106} H33 63 1 1 {} {0.607511976731 0.460283854734 0.170032001501} H34 64 1 1 {} {0.567151996103 0.25905233901 0.375210346446} H35 65 1 1 {} {0.510363823194 0.347854108532 0.357296286104} H36 66 1 1 {} {0.654641564395 0.346885888464 0.4133196639} H37 67 1 1 {} {0.649173627115 0.269347307827 0.287639102259} H38 68 1 1 {} {0.699682644063 0.427780069671 0.29494355168} H39 69 1 1 {} {0.689391235752 0.389938678517 0.197246480055} H40 70 1 1 {} {0.50106831976 0.289959812754 0.186110256223} H41 71 1 1 {} {0.540704026396 0.231210753242 0.193105025292} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end