./iterations/neb0_image04_iter18.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.363830897042 0.561065525429 0.412905795401} C1 1 1 14 {} {0.340518772976 0.534440569299 0.523458073861} Si1 2 1 14 {} {0.425464601745 0.57177298627 0.408467239012} Si2 3 1 8 {} {0.353647437554 0.591215319793 0.599536423662} O1 4 1 8 {} {0.285607044967 0.532615051891 0.5164878942} O2 5 1 6 {} {0.359433693741 0.449232012711 0.55824907763} C2 6 1 6 {} {0.456433953231 0.491240296016 0.393860369982} C3 7 1 8 {} {0.438306395018 0.606899117563 0.507386580548} O3 8 1 8 {} {0.438114919066 0.623598884596 0.325490082023} O4 9 1 14 {} {0.235128420217 0.537227481495 0.557780838068} Si3 10 1 7 {} {0.2154408875 0.459132549241 0.591990602556} N1 11 1 14 {} {0.192973987277 0.450834417033 0.699438052637} Si4 12 1 14 {} {0.215981155085 0.391453083025 0.516924368418} Si5 13 1 7 {} {0.209918224512 0.41264721658 0.406490257565} N2 14 1 7 {} {0.142535218149 0.489856108287 0.719660820247} N3 15 1 1 {} {0.353824540742 0.525352446377 0.360573764965} H1 16 1 1 {} {0.348237220735 0.609397526931 0.395866783686} H2 17 1 1 {} {0.38353071058 0.609581456032 0.589920608771} H3 18 1 1 {} {0.350725584261 0.410640662352 0.5089162175} H4 19 1 1 {} {0.343709086727 0.435422731765 0.621930575915} H5 20 1 1 {} {0.395758766418 0.447998735585 0.568210661985} H6 21 1 1 {} {0.49242136752 0.501062366746 0.390736759414} H7 22 1 1 {} {0.446921265978 0.467067360201 0.330703822382} H8 23 1 1 {} {0.450283798372 0.455753688748 0.448510634396} H9 24 1 1 {} {0.469159686085 0.621041706811 0.513534308341} H10 25 1 1 {} {0.470107151338 0.624799048498 0.313815317081} H11 26 1 1 {} {0.233417194985 0.581416781528 0.638004720637} H12 27 1 1 {} {0.206257824922 0.565362109284 0.48615695115} H13 28 1 1 {} {0.18630104697 0.37776623483 0.71370474917} H14 29 1 1 {} {0.224514068824 0.480017261875 0.76545730727} H15 30 1 1 {} {0.259253654224 0.354904784098 0.522722703696} H16 31 1 1 {} {0.178413328456 0.346806599885 0.543518287925} H17 32 1 1 {} {0.236906086435 0.427295054429 0.370474325826} H18 33 1 1 {} {0.181908894822 0.436051883715 0.384311576304} H19 34 1 1 {} {0.141783031033 0.539463106306 0.734584542564} H20 35 1 1 {} {0.11451388781 0.47610699621 0.686042761528} H21 36 1 6 {} {0.627105697218 0.631632946407 0.350094792001} C4 37 1 14 {} {0.584198727784 0.569112499486 0.38756593788} Si6 38 1 14 {} {0.62141435803 0.720079392786 0.386614482511} Si7 39 1 8 {} {0.534223400977 0.605822294115 0.382142241477} O5 40 1 8 {} {0.584675179306 0.504688614264 0.320380886422} O6 41 1 6 {} {0.594955773149 0.537132895111 0.502470607412} C5 42 1 6 {} {0.639529959291 0.73712306245 0.50381505759} C6 43 1 8 {} {0.566525939563 0.734869989956 0.375132437007} O7 44 1 8 {} {0.64915594859 0.769424710499 0.316756872257} O8 45 1 14 {} {0.578248765512 0.444169858283 0.24747358586} Si8 46 1 7 {} {0.590814150823 0.366166361588 0.290481066062} N4 47 1 14 {} {0.547162487956 0.309791009781 0.314016794322} Si9 48 1 14 {} {0.645352277363 0.340790842542 0.315764041447} Si10 49 1 7 {} {0.68640961797 0.386984030356 0.2646080718} N5 50 1 7 {} {0.523271469831 0.266705327479 0.227039669891} N6 51 1 1 {} {0.660472549849 0.613251779674 0.368859428122} H22 52 1 1 {} {0.626266289092 0.632366567167 0.276446194684} H23 53 1 1 {} {0.536781030034 0.654804775725 0.377526358977} H24 54 1 1 {} {0.627069818775 0.510571380999 0.505187426418} H25 55 1 1 {} {0.568822748981 0.501628914258 0.522734974158} H26 56 1 1 {} {0.595869028392 0.577674676217 0.552040336058} H27 57 1 1 {} {0.634264409514 0.789894460413 0.522002705601} H28 58 1 1 {} {0.675120957657 0.725714892837 0.513193593384} H29 59 1 1 {} {0.620546607386 0.70657169938 0.551573241194} H30 60 1 1 {} {0.556061480496 0.78071530283 0.372205119383} H31 61 1 1 {} {0.667049753311 0.805140773189 0.341833424034} H32 62 1 1 {} {0.530593371948 0.442263911395 0.218720069186} H33 63 1 1 {} {0.607505433175 0.460284195099 0.170027144698} H34 64 1 1 {} {0.567149293891 0.259044187061 0.375228886985} H35 65 1 1 {} {0.510355768323 0.347850133777 0.357310793038} H36 66 1 1 {} {0.654639759562 0.346880540573 0.413314883585} H37 67 1 1 {} {0.649178517947 0.269342962574 0.287638716745} H38 68 1 1 {} {0.6996914536 0.427785726003 0.294948980366} H39 69 1 1 {} {0.689386881453 0.389935308148 0.197232916719} H40 70 1 1 {} {0.501091023496 0.289919457333 0.186177375453} H41 71 1 1 {} {0.540678587535 0.231261599126 0.193168663937} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end