./iterations/neb0_image04_iter37.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.363669607586 0.561099116953 0.413002232418} C1 1 1 14 {} {0.340475578633 0.534510124904 0.523493752242} Si1 2 1 14 {} {0.425323904542 0.571523416268 0.408708645283} Si2 3 1 8 {} {0.353700077829 0.591361550757 0.599439544501} O1 4 1 8 {} {0.285673872427 0.532759222502 0.516297689824} O2 5 1 6 {} {0.35945984205 0.449333490784 0.558232321595} C2 6 1 6 {} {0.456050403005 0.490926152328 0.393916604319} C3 7 1 8 {} {0.438328542749 0.60664123175 0.507618197093} O3 8 1 8 {} {0.437973729876 0.623309646205 0.325778435394} O4 9 1 14 {} {0.235155027685 0.537465043276 0.557705719121} Si3 10 1 7 {} {0.215511928229 0.459347088208 0.591889087569} N1 11 1 14 {} {0.19310459373 0.451037133404 0.699363508464} Si4 12 1 14 {} {0.2160387159 0.391655640784 0.51685454373} Si5 13 1 7 {} {0.209941980231 0.412674395766 0.40631886303} N2 14 1 7 {} {0.142640608992 0.489990379314 0.71970461572} N3 15 1 1 {} {0.353873059521 0.525371135364 0.360468680136} H1 16 1 1 {} {0.348304329926 0.609598010937 0.395826006998} H2 17 1 1 {} {0.383607191994 0.609655626927 0.58988667011} H3 18 1 1 {} {0.350756563968 0.410753244642 0.508845097086} H4 19 1 1 {} {0.343704990529 0.435538351744 0.621874752567} H5 20 1 1 {} {0.395770821325 0.448085329942 0.568232638534} H6 21 1 1 {} {0.492055653854 0.500485532815 0.39100117212} H7 22 1 1 {} {0.446556698778 0.466596443682 0.330911461952} H8 23 1 1 {} {0.449781272357 0.455482195332 0.448471931789} H9 24 1 1 {} {0.469293185518 0.620304879339 0.513513828514} H10 25 1 1 {} {0.469849576434 0.623187734088 0.312980534955} H11 26 1 1 {} {0.233553079262 0.581673134107 0.637888986924} H12 27 1 1 {} {0.206325866691 0.565556933981 0.486052150202} H13 28 1 1 {} {0.186445825673 0.377948240116 0.713644174321} H14 29 1 1 {} {0.22464216314 0.480238630739 0.765401869251} H15 30 1 1 {} {0.259309724536 0.355051120359 0.52268629615} H16 31 1 1 {} {0.178419530057 0.347092945399 0.543526840648} H17 32 1 1 {} {0.236984966379 0.427510043231 0.370491950021} H18 33 1 1 {} {0.182015328105 0.436304088348 0.384327968011} H19 34 1 1 {} {0.141886671113 0.539657105157 0.734518210215} H20 35 1 1 {} {0.114621226186 0.47626641255 0.686086383674} H21 36 1 6 {} {0.627358400148 0.631514305639 0.35008591502} C4 37 1 14 {} {0.584249790419 0.569281808834 0.387610077244} Si6 38 1 14 {} {0.621520445958 0.719982948811 0.386608472054} Si7 39 1 8 {} {0.534694764315 0.607133570327 0.382288829721} O5 40 1 8 {} {0.584401080542 0.504848085293 0.320297981173} O6 41 1 6 {} {0.594885821019 0.537087733159 0.502473903661} C5 42 1 6 {} {0.639509006975 0.737010407907 0.503867511742} C6 43 1 8 {} {0.566634123923 0.73487149763 0.375301019986} O7 44 1 8 {} {0.649016350996 0.76954623262 0.316624595041} O8 45 1 14 {} {0.57814054829 0.444131063469 0.247605880358} Si8 46 1 7 {} {0.590750626769 0.366174156642 0.290645225087} N4 47 1 14 {} {0.547093500365 0.309676605799 0.314069996584} Si9 48 1 14 {} {0.645300202241 0.340760709085 0.315781930792} Si10 49 1 7 {} {0.686298427423 0.387014165634 0.264590618756} N5 50 1 7 {} {0.523262532115 0.266616999364 0.227026145972} N6 51 1 1 {} {0.66080148542 0.613259998976 0.368607691287} H22 52 1 1 {} {0.626296923252 0.632241794867 0.276430274893} H23 53 1 1 {} {0.53812993826 0.656212910137 0.377983448886} H24 54 1 1 {} {0.626943254063 0.510395831676 0.505545135509} H25 55 1 1 {} {0.568677808884 0.501682836036 0.522602819114} H26 56 1 1 {} {0.595744449107 0.577613959758 0.552051291222} H27 57 1 1 {} {0.634211436289 0.789773224794 0.522027230214} H28 58 1 1 {} {0.675083683764 0.725572664692 0.513268308622} H29 59 1 1 {} {0.620482724771 0.70642629808 0.551522797571} H30 60 1 1 {} {0.555924537762 0.780552485315 0.372170978143} H31 61 1 1 {} {0.66699001193 0.805093527723 0.341690902125} H32 62 1 1 {} {0.530544047011 0.442107604676 0.21872622881} H33 63 1 1 {} {0.607392185617 0.460197368261 0.170104051373} H34 64 1 1 {} {0.567050765657 0.25896634422 0.375216628754} H35 65 1 1 {} {0.510289390272 0.347649267201 0.357261395537} H36 66 1 1 {} {0.654590039079 0.346838457046 0.4133154278} H37 67 1 1 {} {0.649175798041 0.269366544253 0.287653851061} H38 68 1 1 {} {0.699732308452 0.427689257525 0.294922725337} H39 69 1 1 {} {0.689319143874 0.389861020655 0.197241318409} H40 70 1 1 {} {0.500951093335 0.289705899864 0.186226641734} H41 71 1 1 {} {0.540669541986 0.231087888698 0.193143007442} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end