./iterations/neb0_image04_iter8.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.363816230803 0.561062423998 0.412850149222} C1 1 1 14 {} {0.340431398421 0.53438239914 0.523521974899} Si1 2 1 14 {} {0.425601580799 0.57172330397 0.408457547557} Si2 3 1 8 {} {0.353651415049 0.591184316903 0.599562196469} O1 4 1 8 {} {0.285632088191 0.532582087746 0.516532945995} O2 5 1 6 {} {0.359444942232 0.449180462486 0.558267447152} C2 6 1 6 {} {0.456614667909 0.491262176141 0.39381993226} C3 7 1 8 {} {0.438301875564 0.606937783749 0.507481213863} O3 8 1 8 {} {0.438221041031 0.623589784367 0.325251121166} O4 9 1 14 {} {0.23503132188 0.536972368727 0.557867015282} Si3 10 1 7 {} {0.215428042994 0.459105285928 0.592021289494} N1 11 1 14 {} {0.192924147858 0.450838600364 0.699292391864} Si4 12 1 14 {} {0.215948543521 0.391517607017 0.51695217044} Si5 13 1 7 {} {0.209908866768 0.412664258816 0.406557320592} N2 14 1 7 {} {0.142523079134 0.489803779582 0.719623855067} N3 15 1 1 {} {0.353780664036 0.525314975272 0.36057513709} H1 16 1 1 {} {0.348167401023 0.609393364454 0.395865366906} H2 17 1 1 {} {0.383506823348 0.609557743852 0.589941421298} H3 18 1 1 {} {0.350707938354 0.410616346981 0.508917668883} H4 19 1 1 {} {0.343703650562 0.435396339546 0.621956626596} H5 20 1 1 {} {0.395760401633 0.447976729466 0.568216835867} H6 21 1 1 {} {0.492461024724 0.501180393334 0.390682652416} H7 22 1 1 {} {0.447013130562 0.467263964101 0.330786824041} H8 23 1 1 {} {0.450418908825 0.45593807761 0.44838338854} H9 24 1 1 {} {0.469117406638 0.621235427668 0.513508985838} H10 25 1 1 {} {0.470240955394 0.625362438883 0.313992457058} H11 26 1 1 {} {0.233387198817 0.581392259757 0.638081793684} H12 27 1 1 {} {0.206239038633 0.565328393889 0.486166583317} H13 28 1 1 {} {0.186258603182 0.377677424077 0.713734990419} H14 29 1 1 {} {0.224498480182 0.479972339702 0.765505036961} H15 30 1 1 {} {0.259268268819 0.354837624364 0.522742766229} H16 31 1 1 {} {0.178389292401 0.346691255468 0.543532987974} H17 32 1 1 {} {0.236884320657 0.427229512203 0.370468848061} H18 33 1 1 {} {0.181887968979 0.43596788072 0.384321415869} H19 34 1 1 {} {0.141755082947 0.53940080198 0.73460134837} H20 35 1 1 {} {0.114495175419 0.476067713276 0.686044801673} H21 36 1 6 {} {0.627044917668 0.631587867979 0.350090463713} C4 37 1 14 {} {0.58419471068 0.569117299186 0.387634848207} Si6 38 1 14 {} {0.621421702112 0.720162882032 0.386625111025} Si7 39 1 8 {} {0.533991399203 0.60533549885 0.38210656667} O5 40 1 8 {} {0.584712372427 0.504606221633 0.320338202919} O6 41 1 6 {} {0.594972389851 0.537156899418 0.50241976526} C5 42 1 6 {} {0.639545771341 0.737154614254 0.503795400638} C6 43 1 8 {} {0.566520031062 0.734888730371 0.375088329438} O7 44 1 8 {} {0.649213012949 0.769426331371 0.316786903443} O8 45 1 14 {} {0.578225671524 0.444337720793 0.247408429974} Si8 46 1 7 {} {0.590793164046 0.366107000848 0.29046525212} N4 47 1 14 {} {0.547203250251 0.309891749042 0.314251577179} Si9 48 1 14 {} {0.645429317648 0.340758903659 0.31581003388} Si10 49 1 7 {} {0.686437747775 0.386968571603 0.264623889335} N5 50 1 7 {} {0.523232295766 0.26667294508 0.227002098753} N6 51 1 1 {} {0.660417060567 0.613283942357 0.368884168508} H22 52 1 1 {} {0.626292318766 0.632412740322 0.276467026195} H23 53 1 1 {} {0.536341380417 0.654353548582 0.377352750983} H24 54 1 1 {} {0.627091053543 0.510618219565 0.505107877126} H25 55 1 1 {} {0.568876325497 0.501630877903 0.522750802023} H26 56 1 1 {} {0.595906057653 0.577682053235 0.552025648157} H27 57 1 1 {} {0.634282223999 0.789932738332 0.521998455586} H28 58 1 1 {} {0.67513604058 0.72575909842 0.513195561753} H29 59 1 1 {} {0.62056557235 0.706608919792 0.551582993396} H30 60 1 1 {} {0.556103826605 0.780774933499 0.372209307747} H31 61 1 1 {} {0.667068973294 0.80516687503 0.341862119325} H32 62 1 1 {} {0.530667827212 0.44230673173 0.218768051123} H33 63 1 1 {} {0.607526711504 0.460303114614 0.170035968047} H34 64 1 1 {} {0.567157154766 0.259126721699 0.375159867975} H35 65 1 1 {} {0.510424051111 0.347845806464 0.357245957759} H36 66 1 1 {} {0.654649453817 0.346892147296 0.413268443494} H37 67 1 1 {} {0.649163314149 0.269387000889 0.287650792673} H38 68 1 1 {} {0.699676350158 0.427816775796 0.294953656952} H39 69 1 1 {} {0.689407555151 0.38996658348 0.197227532779} H40 70 1 1 {} {0.501103617946 0.290012690811 0.186119532932} H41 71 1 1 {} {0.54070672246 0.231273841872 0.193151732175} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end