./iterations/neb0_image06_iter35.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.367292780515 0.571108502373 0.412419562983} C1 1 1 14 {} {0.344301462592 0.544527435035 0.522884097616} Si1 2 1 14 {} {0.428868330375 0.580652329089 0.407988085766} Si2 3 1 8 {} {0.35759893629 0.601405321171 0.598717347862} O1 4 1 8 {} {0.289437503908 0.542744292799 0.515659693242} O2 5 1 6 {} {0.363362839511 0.459332398036 0.55745484002} C2 6 1 6 {} {0.458022218336 0.498647423432 0.393132558696} C3 7 1 8 {} {0.442085020606 0.616167576379 0.506641304165} O3 8 1 8 {} {0.440996332869 0.633224862129 0.325381920374} O4 9 1 14 {} {0.239086777002 0.547401241023 0.556912454278} Si3 10 1 7 {} {0.219479948248 0.469323177647 0.591092016891} N1 11 1 14 {} {0.197081586359 0.461025688363 0.698591493993} Si4 12 1 14 {} {0.219996777601 0.401602205583 0.515974805318} Si5 13 1 7 {} {0.213903604328 0.422576125406 0.40544550033} N2 14 1 7 {} {0.146615538695 0.499986032522 0.718922608024} N3 15 1 1 {} {0.357753933585 0.535334473047 0.359727919415} H1 16 1 1 {} {0.352136580253 0.619754723256 0.39502583809} H2 17 1 1 {} {0.387467349468 0.619592983427 0.588964793704} H3 18 1 1 {} {0.354712020652 0.420772116391 0.508091897382} H4 19 1 1 {} {0.347634997254 0.445508398573 0.621092442108} H5 20 1 1 {} {0.399666694489 0.45811711929 0.567434555259} H6 21 1 1 {} {0.493939316093 0.507313497019 0.39051632991} H7 22 1 1 {} {0.448510912745 0.474425105317 0.330137092782} H8 23 1 1 {} {0.451366270623 0.463396150798 0.447650962742} H9 24 1 1 {} {0.473080450048 0.629365981822 0.513096683948} H10 25 1 1 {} {0.472400584706 0.631724862885 0.308917699765} H11 26 1 1 {} {0.237426359907 0.591661912536 0.637138988648} H12 27 1 1 {} {0.210210284129 0.575526802177 0.485263922621} H13 28 1 1 {} {0.190395668642 0.387954288918 0.712902797296} H14 29 1 1 {} {0.228624697405 0.490232865237 0.764648892495} H15 30 1 1 {} {0.263264169359 0.364990798867 0.521857289081} H16 31 1 1 {} {0.182376668606 0.357060724107 0.54266565224} H17 32 1 1 {} {0.240943598507 0.437496390315 0.36965701757} H18 33 1 1 {} {0.185970937936 0.446283426914 0.383484538074} H19 34 1 1 {} {0.14584486978 0.549655127045 0.733690455695} H20 35 1 1 {} {0.118603173281 0.486239971285 0.685267337522} H21 36 1 6 {} {0.624619477768 0.621694528619 0.350728794718} C4 37 1 14 {} {0.581357743963 0.56003922326 0.388526929233} Si6 38 1 14 {} {0.618060611904 0.710107335857 0.387430998513} Si7 39 1 8 {} {0.533184410446 0.601320854606 0.383495772685} O5 40 1 8 {} {0.580528709249 0.495507876795 0.321021927068} O6 41 1 6 {} {0.591316976831 0.527056610759 0.503276519606} C5 42 1 6 {} {0.635578319272 0.727020442943 0.504840672918} C6 43 1 8 {} {0.563196282689 0.725608578699 0.376083059113} O7 44 1 8 {} {0.645235566325 0.759767080933 0.317354228494} O8 45 1 14 {} {0.574264188281 0.434589777919 0.248682757154} Si8 46 1 7 {} {0.586733442888 0.356315305035 0.291646224293} N4 47 1 14 {} {0.54310298291 0.299854774626 0.314817354671} Si9 48 1 14 {} {0.641294485355 0.330819374194 0.316723136151} Si10 49 1 7 {} {0.682254492241 0.377071717359 0.26539136651} N5 50 1 7 {} {0.519330895646 0.25671812934 0.227744338285} N6 51 1 1 {} {0.658251130268 0.604007166603 0.368668544198} H22 52 1 1 {} {0.622836247969 0.622284851563 0.277133366946} H23 53 1 1 {} {0.538065416134 0.65039150444 0.379359518129} H24 54 1 1 {} {0.623227283037 0.50003741875 0.507218711114} H25 55 1 1 {} {0.564814659596 0.491929553472 0.522729257127} H26 56 1 1 {} {0.591948816289 0.567536665922 0.5529431383} H27 57 1 1 {} {0.630249385439 0.779801917616 0.522902288131} H28 58 1 1 {} {0.671140354644 0.715565686286 0.514174270419} H29 59 1 1 {} {0.616528136482 0.696408064212 0.55244589212} H30 60 1 1 {} {0.552001055926 0.771019489608 0.37285516721} H31 61 1 1 {} {0.663138087013 0.795394082511 0.34251854} H32 62 1 1 {} {0.526673804166 0.432253388636 0.219661132011} H33 63 1 1 {} {0.603495309011 0.450284892499 0.171005413103} H34 64 1 1 {} {0.56306933365 0.249086198378 0.376008004147} H35 65 1 1 {} {0.506289306672 0.337803592913 0.358082361643} H36 66 1 1 {} {0.650633779712 0.336841153309 0.414209381313} H37 67 1 1 {} {0.645202806752 0.259397968684 0.288511737549} H38 68 1 1 {} {0.695809798317 0.417646286089 0.295777117924} H39 69 1 1 {} {0.685358640343 0.379833817414 0.198113140789} H40 70 1 1 {} {0.496955782042 0.279691709121 0.187001998159} H41 71 1 1 {} {0.536715411184 0.221096892354 0.194017150185} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end