./iterations/neb0_image06_iter7.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image06 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.36759936005 0.570696735825 0.41208291828} C1 1 1 14 {} {0.344376272161 0.544035446478 0.522784010445} Si1 2 1 14 {} {0.429549633684 0.580937346874 0.407615839512} Si2 3 1 8 {} {0.357424180892 0.600782372923 0.598751873365} O1 4 1 8 {} {0.28921242821 0.542182281014 0.515834360471} O2 5 1 6 {} {0.36321787479 0.458821827422 0.557468203976} C2 6 1 6 {} {0.460040306656 0.500178633768 0.393089638738} C3 7 1 8 {} {0.442034232638 0.616664138202 0.506686850053} O3 8 1 8 {} {0.441838648583 0.633478165501 0.324512233508} O4 9 1 14 {} {0.238930999296 0.546733722596 0.556983497321} Si3 10 1 7 {} {0.219210347005 0.468648720711 0.591239475176} N1 11 1 14 {} {0.196764443517 0.460397253652 0.698656974736} Si4 12 1 14 {} {0.2197724463 0.401014896026 0.516138410417} Si5 13 1 7 {} {0.213690385895 0.422297686584 0.405768188604} N2 14 1 7 {} {0.146309300051 0.499422522532 0.71879399474} N3 15 1 1 {} {0.357592194888 0.534933783511 0.359791588327} H1 16 1 1 {} {0.351950752676 0.619023778213 0.395072030899} H2 17 1 1 {} {0.387306443438 0.61916654138 0.589136308369} H3 18 1 1 {} {0.354520446041 0.42023387152 0.508136722591} H4 19 1 1 {} {0.347506770108 0.445006820608 0.621181485835} H5 20 1 1 {} {0.399567207906 0.457598848832 0.567408666919} H6 21 1 1 {} {0.495527195042 0.510157388334 0.389942870138} H7 22 1 1 {} {0.450674132156 0.476705135444 0.329896695487} H8 23 1 1 {} {0.454021940715 0.465304165838 0.44773620775} H9 24 1 1 {} {0.472894352856 0.630789220646 0.512841859489} H10 25 1 1 {} {0.473812938618 0.634902591016 0.312668082973} H11 26 1 1 {} {0.237177211262 0.590984532922 0.637286936697} H12 27 1 1 {} {0.210039654329 0.5749212077 0.485394064704} H13 28 1 1 {} {0.190053788173 0.387317630057 0.712931530402} H14 29 1 1 {} {0.228292326896 0.489580927923 0.764689479182} H15 30 1 1 {} {0.26305392356 0.364471752834 0.521961898599} H16 31 1 1 {} {0.182192668888 0.35631211294 0.542738294615} H17 32 1 1 {} {0.24070442378 0.436843139128 0.369658086179} H18 33 1 1 {} {0.185688702149 0.445570170054 0.383525788086} H19 34 1 1 {} {0.145554861782 0.549031784435 0.733820914837} H20 35 1 1 {} {0.118289089292 0.485680788978 0.685253958526} H21 36 1 6 {} {0.623306899557 0.622021651151 0.350875378779} C4 37 1 14 {} {0.580808787574 0.55944291444 0.388366616556} Si6 38 1 14 {} {0.617643573529 0.710490389729 0.387424133036} Si7 39 1 8 {} {0.531197705183 0.596675323675 0.382924939907} O5 40 1 8 {} {0.580901396246 0.495171745635 0.321234891069} O6 41 1 6 {} {0.591173405236 0.527538299536 0.50322749583} C5 42 1 6 {} {0.635735321115 0.727540692989 0.504594513547} C6 43 1 8 {} {0.562687244933 0.725307118059 0.375877480592} O7 44 1 8 {} {0.645429159377 0.75980647697 0.317604424875} O8 45 1 14 {} {0.574455880608 0.434573074872 0.248197868789} Si8 46 1 7 {} {0.58697625172 0.356552524227 0.291228281439} N4 47 1 14 {} {0.54339660876 0.300317083287 0.314928098783} Si9 48 1 14 {} {0.641616274558 0.331162216161 0.316551403747} Si10 49 1 7 {} {0.682625440887 0.377357251961 0.265444782018} N5 50 1 7 {} {0.519435756102 0.25709150339 0.227854772063} N6 51 1 1 {} {0.656635254002 0.603685188294 0.369663102014} H22 52 1 1 {} {0.622496068563 0.622794166487 0.277248931848} H23 53 1 1 {} {0.532957451916 0.64553609611 0.378226959682} H24 54 1 1 {} {0.623294005543 0.501004313112 0.505883907905} H25 55 1 1 {} {0.565073926069 0.492017887055 0.523530911357} H26 56 1 1 {} {0.592107353512 0.568059321136 0.5528206664} H27 57 1 1 {} {0.63048115262 0.780314148797 0.522788715683} H28 58 1 1 {} {0.671327153121 0.716143751555 0.513983079055} H29 59 1 1 {} {0.616767928061 0.696991191363 0.552385854905} H30 60 1 1 {} {0.552296939499 0.771187494794 0.372994024383} H31 61 1 1 {} {0.663265831583 0.795550668804 0.342650760997} H32 62 1 1 {} {0.526867564138 0.432708119448 0.219557424406} H33 63 1 1 {} {0.603732925271 0.450705411231 0.170820984898} H34 64 1 1 {} {0.563352021059 0.249507360157 0.37596949204} H35 65 1 1 {} {0.506603125759 0.338246266588 0.358062249517} H36 66 1 1 {} {0.65085106388 0.337270535409 0.414076506914} H37 67 1 1 {} {0.645353553977 0.259758244602 0.288455298537} H38 68 1 1 {} {0.695861147486 0.418184168521 0.29573202865} H39 69 1 1 {} {0.685607102344 0.380346215344 0.198045709817} H40 70 1 1 {} {0.497295212032 0.280406936179 0.186902228596} H41 71 1 1 {} {0.536913952015 0.221642556253 0.193937764452} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end