./iterations/neb0_image08_iter19.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.371386009928 0.581186930607 0.41134179973} C1 1 1 14 {} {0.348252807021 0.554276625887 0.521677676152} Si1 2 1 14 {} {0.432678076493 0.590265653495 0.407145107092} Si2 3 1 8 {} {0.361462925359 0.611051071915 0.597973827939} O1 4 1 8 {} {0.293488097385 0.552470596927 0.514929316317} O2 5 1 6 {} {0.36724382629 0.469081050236 0.556692229097} C2 6 1 6 {} {0.460012605957 0.506004814049 0.392848095168} C3 7 1 8 {} {0.446048823393 0.626289671506 0.504882218764} O3 8 1 8 {} {0.445367978985 0.643166860931 0.325435366532} O4 9 1 14 {} {0.242933001787 0.556935397654 0.556232818927} Si3 10 1 7 {} {0.223285258431 0.478977866889 0.590363615598} N1 11 1 14 {} {0.200810501178 0.470692279681 0.697757333419} Si4 12 1 14 {} {0.223815325294 0.411319886471 0.515248461064} Si5 13 1 7 {} {0.217759803562 0.432389863429 0.404792726383} N2 14 1 7 {} {0.150370334007 0.509686102677 0.718058998496} N3 15 1 1 {} {0.361658097551 0.545188294179 0.359082771836} H1 16 1 1 {} {0.355955920969 0.629389957314 0.39430638507} H2 17 1 1 {} {0.391328721242 0.629392556137 0.58821372483} H3 18 1 1 {} {0.358588006509 0.430484811786 0.507282225123} H4 19 1 1 {} {0.351499332349 0.455261067918 0.620348027172} H5 20 1 1 {} {0.403552510694 0.467815486756 0.566526324928} H6 21 1 1 {} {0.495478572496 0.514346442177 0.389894969509} H7 22 1 1 {} {0.451909750979 0.48338297674 0.327144117525} H8 23 1 1 {} {0.454724666886 0.471258028752 0.449135524968} H9 24 1 1 {} {0.476729594808 0.640354542316 0.512644131726} H10 25 1 1 {} {0.476482676229 0.644509287184 0.308612586194} H11 26 1 1 {} {0.24124244626 0.601272700936 0.636409062664} H12 27 1 1 {} {0.214069802243 0.585195316929 0.484535824774} H13 28 1 1 {} {0.194130004838 0.397536861685 0.712135424777} H14 29 1 1 {} {0.232388783904 0.499849772674 0.763895199174} H15 30 1 1 {} {0.267117993801 0.374675332489 0.521105472836} H16 31 1 1 {} {0.186240312365 0.366609816657 0.541861253744} H17 32 1 1 {} {0.244746721639 0.447108664675 0.368819923667} H18 33 1 1 {} {0.189763801235 0.455875703911 0.382695972176} H19 34 1 1 {} {0.149619311397 0.559276183651 0.732934825471} H20 35 1 1 {} {0.122377469033 0.495941831768 0.684412897019} H21 36 1 6 {} {0.62124843875 0.612290979397 0.351224260569} C4 37 1 14 {} {0.579007387908 0.550383437992 0.389109452228} Si6 38 1 14 {} {0.61387818605 0.700289074747 0.388358612023} Si7 39 1 8 {} {0.532542583931 0.593815630701 0.383671678677} O5 40 1 8 {} {0.577014996651 0.485408860068 0.322066948029} O6 41 1 6 {} {0.587516836136 0.517064293295 0.504451540707} C5 42 1 6 {} {0.631660150444 0.71730150074 0.505512634248} C6 43 1 8 {} {0.558974500422 0.716174222022 0.37677240807} O7 44 1 8 {} {0.641239811049 0.749737523416 0.318443301352} O8 45 1 14 {} {0.570436670036 0.424529453359 0.249198490214} Si8 46 1 7 {} {0.582914351109 0.346364914048 0.292206288129} N4 47 1 14 {} {0.539316817203 0.290100655961 0.315863290988} Si9 48 1 14 {} {0.637530285753 0.320974750164 0.317397017477} Si10 49 1 7 {} {0.678558387961 0.36719101078 0.266234091061} N5 50 1 7 {} {0.515423409941 0.246873310878 0.228543044483} N6 51 1 1 {} {0.654418419233 0.593972612643 0.369930988827} H22 52 1 1 {} {0.618670374766 0.612475197383 0.277866193637} H23 53 1 1 {} {0.533780296408 0.643796412941 0.37918530596} H24 54 1 1 {} {0.619507113203 0.490294253422 0.507691912628} H25 55 1 1 {} {0.560989841721 0.481958109075 0.523840258936} H26 56 1 1 {} {0.588090871061 0.557873050289 0.553610390391} H27 57 1 1 {} {0.626419874909 0.770101484894 0.523648774105} H28 58 1 1 {} {0.667248352546 0.70588603466 0.514794193762} H29 59 1 1 {} {0.612711759999 0.686732855236 0.553274224109} H30 60 1 1 {} {0.548231416314 0.761793913697 0.373706245113} H31 61 1 1 {} {0.659183440686 0.785336171042 0.343388184166} H32 62 1 1 {} {0.522779620458 0.422515085799 0.220442320344} H33 63 1 1 {} {0.599664578522 0.440496961531 0.171744488249} H34 64 1 1 {} {0.559302970898 0.239285859124 0.376817193658} H35 65 1 1 {} {0.502512159709 0.32811270671 0.358938070702} H36 66 1 1 {} {0.646803878796 0.327081645138 0.414928909265} H37 67 1 1 {} {0.641336794924 0.249575332642 0.289268119731} H38 68 1 1 {} {0.691883101118 0.407965108767 0.296556652292} H39 69 1 1 {} {0.681545441839 0.370132456419 0.198854097964} H40 70 1 1 {} {0.493221742233 0.270087360293 0.18781544965} H41 71 1 1 {} {0.532837600132 0.211443722238 0.194820333547} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end