./iterations/neb0_image08_iter4.sci output for 42: 3.3A-->1.3A 712(amd-3) Si-CH3H...HO-Si two dimer closed (TSS for CH3...OH)
Status: finished#MD System 2.0 @Title neb0_image08 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.371324156969 0.580353149161 0.411288676271} C1 1 1 14 {} {0.34811606066 0.553542029372 0.521956777874} Si1 2 1 14 {} {0.433106824275 0.590228326958 0.406978627987} Si2 3 1 8 {} {0.36123265233 0.610383493004 0.598010853728} O1 4 1 8 {} {0.293091999664 0.551743907636 0.515041516659} O2 5 1 6 {} {0.367015396718 0.468414929333 0.556698947014} C2 6 1 6 {} {0.463525722601 0.509144089571 0.392442833223} C3 7 1 8 {} {0.445939597686 0.626287251923 0.505888006937} O3 8 1 8 {} {0.446025531904 0.642925987962 0.323594114341} O4 9 1 14 {} {0.242699690314 0.556326513417 0.55624929821} Si3 10 1 7 {} {0.222984108812 0.478241185501 0.590434063393} N1 11 1 14 {} {0.200539932571 0.469953824346 0.697869175316} Si4 12 1 14 {} {0.223566307634 0.410559880669 0.515363476915} Si5 13 1 7 {} {0.217487968313 0.431929866345 0.405031791553} N2 14 1 7 {} {0.150098590092 0.509014206152 0.717959044721} N3 15 1 1 {} {0.361377192867 0.544506596965 0.358999314911} H1 16 1 1 {} {0.355719920657 0.628599612093 0.394295884408} H2 17 1 1 {} {0.391081585919 0.628760212436 0.588369184035} H3 18 1 1 {} {0.3583099179 0.429813709084 0.507341613682} H4 19 1 1 {} {0.3513023376 0.454593369904 0.62039618724} H5 20 1 1 {} {0.403348474732 0.46717824369 0.566617045347} H6 21 1 1 {} {0.498672862942 0.518849826689 0.389215405697} H7 22 1 1 {} {0.454480243761 0.486390089737 0.329148986228} H8 23 1 1 {} {0.457836690061 0.475048190238 0.446793942953} H9 24 1 1 {} {0.476642369301 0.640557567273 0.512086414772} H10 25 1 1 {} {0.477641553917 0.645108512974 0.311981278251} H11 26 1 1 {} {0.240954245945 0.600556119529 0.636529145261} H12 27 1 1 {} {0.213815512008 0.584488844808 0.484614969326} H13 28 1 1 {} {0.193823828751 0.396872459962 0.712153107761} H14 29 1 1 {} {0.232080549802 0.499158798154 0.763903222457} H15 30 1 1 {} {0.266858006036 0.374047587906 0.521196033008} H16 31 1 1 {} {0.185973523152 0.365862732275 0.541948344995} H17 32 1 1 {} {0.244488390629 0.446400271851 0.368859151943} H18 33 1 1 {} {0.189456699425 0.45513931466 0.382726030214} H19 34 1 1 {} {0.149331693871 0.558588068597 0.733037717852} H20 35 1 1 {} {0.122066493688 0.495260636438 0.684460373819} H21 36 1 6 {} {0.619454438018 0.61243458888 0.351691683804} C4 37 1 14 {} {0.577059990268 0.549799853656 0.389134767637} Si6 38 1 14 {} {0.613919425902 0.700927252562 0.388190924991} Si7 39 1 8 {} {0.528290316539 0.588876126984 0.383417215855} O5 40 1 8 {} {0.577143656824 0.485611594651 0.322083870022} O6 41 1 6 {} {0.587376254188 0.517965641531 0.503984629073} C5 42 1 6 {} {0.631941811169 0.717966652941 0.505378679181} C6 43 1 8 {} {0.558874512196 0.715735329525 0.37664185182} O7 44 1 8 {} {0.64162575548 0.750193170328 0.318399480073} O8 45 1 14 {} {0.570657551166 0.424940516724 0.248998769859} Si8 46 1 7 {} {0.583261771601 0.347003741192 0.292077195873} N4 47 1 14 {} {0.539563994877 0.290608805758 0.315536875004} Si9 48 1 14 {} {0.637752873934 0.321599777797 0.317351386279} Si10 49 1 7 {} {0.678888762221 0.367749863811 0.26619812637} N5 50 1 7 {} {0.515610285637 0.247456654017 0.228689100446} N6 51 1 1 {} {0.652854697806 0.594092370326 0.370474346967} H22 52 1 1 {} {0.618712393791 0.613217955832 0.278040426241} H23 53 1 1 {} {0.528870838077 0.635166521857 0.37889311635} H24 54 1 1 {} {0.619524423208 0.491406687937 0.506651055252} H25 55 1 1 {} {0.561312617827 0.48242373828 0.524322873451} H26 56 1 1 {} {0.588330024949 0.558476733315 0.553617743678} H27 57 1 1 {} {0.626696871221 0.770741509571 0.523581632902} H28 58 1 1 {} {0.667544296047 0.706567646868 0.514772591062} H29 59 1 1 {} {0.612982352665 0.68741209916 0.553174679038} H30 60 1 1 {} {0.548515129165 0.761650245781 0.37378493784} H31 61 1 1 {} {0.659489097893 0.78598614508 0.343464866618} H32 62 1 1 {} {0.523094361567 0.423143939019 0.220364476105} H33 63 1 1 {} {0.599945580576 0.441124176628 0.171598843427} H34 64 1 1 {} {0.559576609287 0.239954843964 0.376774354431} H35 65 1 1 {} {0.502860008177 0.328651388735 0.358840612424} H36 66 1 1 {} {0.64707059288 0.327675521008 0.414828473318} H37 67 1 1 {} {0.641565302899 0.250189419794 0.289250766238} H38 68 1 1 {} {0.692063127886 0.408606852103 0.296515878117} H39 69 1 1 {} {0.681818753407 0.370775888553 0.198839910149} H40 70 1 1 {} {0.493537869714 0.270851423188 0.187717373612} H41 71 1 1 {} {0.533119341393 0.212122166686 0.194787543116} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 20 5 0 0 19 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 20 {0 0 0} 0 28 5 19 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end