iterations/neb0_image01_iter18.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349257153113 0.559856349706 0.421634039476} C1 1 1 14 {} {0.330182006131 0.526824761565 0.532678598391} Si1 2 1 14 {} {0.404474553103 0.602025055603 0.417374980948} Si2 3 1 8 {} {0.333474899184 0.587092687484 0.607920654029} O1 4 1 8 {} {0.277256467447 0.504953185422 0.524697253516} O2 5 1 6 {} {0.361864677863 0.450898573869 0.568094542601} C2 6 1 6 {} {0.453586717138 0.544427671441 0.411161291383} C3 7 1 8 {} {0.406136420647 0.646299727704 0.512537567639} O3 8 1 8 {} {0.404801679493 0.653118829236 0.329772944007} O4 9 1 14 {} {0.22491294547 0.510471859775 0.555326901024} Si3 10 1 7 {} {0.205326077588 0.431741872803 0.586790419897} N1 11 1 14 {} {0.169300566683 0.427479844372 0.678667142606} Si4 12 1 14 {} {0.220931738869 0.361758157472 0.5227708195} Si5 13 1 7 {} {0.222127320826 0.374307450369 0.409218021471} N2 14 1 7 {} {0.121788494732 0.475823663322 0.671511945049} N3 15 1 1 {} {0.348825929628 0.519427634964 0.371576211157} H1 16 1 1 {} {0.32429799632 0.596994507122 0.399630520785} H2 17 1 1 {} {0.357257193856 0.619287743283 0.594857140752} H3 18 1 1 {} {0.358542164938 0.409887853457 0.519606317561} H4 19 1 1 {} {0.349207326066 0.432835929959 0.632610672758} H5 20 1 1 {} {0.397573421823 0.461900617683 0.576362230983} H6 21 1 1 {} {0.485365239834 0.572049406047 0.410405761867} H7 22 1 1 {} {0.45219733279 0.513814590436 0.350226962749} H8 23 1 1 {} {0.454544882983 0.510243935507 0.468593182031} H9 24 1 1 {} {0.431321019258 0.675779228507 0.522800267094} H10 25 1 1 {} {0.433161626166 0.661685288502 0.300814473788} H11 26 1 1 {} {0.219201399607 0.556158452103 0.63333183228} H12 27 1 1 {} {0.199454391429 0.537083298744 0.477589738617} H13 28 1 1 {} {0.156433218445 0.355778256099 0.686818418228} H14 29 1 1 {} {0.192360630485 0.451832525519 0.760541934594} H15 30 1 1 {} {0.266859632564 0.340078948194 0.547686702967} H16 31 1 1 {} {0.187797108218 0.308356644969 0.543117369026} H17 32 1 1 {} {0.248607389833 0.398184817258 0.381227948971} H18 33 1 1 {} {0.193657437061 0.384862203905 0.375196493278} H19 34 1 1 {} {0.121612183381 0.523451952627 0.695221432248} H20 35 1 1 {} {0.0991407243039 0.469844211689 0.621742650265} H21 36 1 6 {} {0.592704767133 0.322782285708 0.310237861192} C4 37 1 14 {} {0.587912031468 0.35633891282 0.427210975019} Si6 38 1 14 {} {0.576740469612 0.233700815175 0.292341380094} Si7 39 1 8 {} {0.616531921662 0.307246735552 0.495263636582} O5 40 1 8 {} {0.61056612263 0.431384937599 0.432223493911} O6 41 1 6 {} {0.528658088816 0.365083513661 0.463824820466} C5 42 1 6 {} {0.515845656855 0.22306069926 0.268743510147} C6 43 1 8 {} {0.592072327708 0.195063905723 0.386583769824} O7 44 1 8 {} {0.606449220826 0.196667396278 0.212459964225} O8 45 1 14 {} {0.654313080205 0.476202565006 0.460906190049} Si8 46 1 7 {} {0.638803917798 0.557269159442 0.487962949801} N4 47 1 14 {} {0.645156776354 0.584868584562 0.598324807979} Si9 48 1 14 {} {0.614863163725 0.610896455669 0.408788220735} Si10 49 1 7 {} {0.625944381182 0.59160232321 0.299429196112} N5 50 1 7 {} {0.698160978797 0.604749022612 0.634755910809} N6 51 1 1 {} {0.573281489502 0.354544864973 0.26428472345} H22 52 1 1 {} {0.628031217781 0.327901401788 0.290644506668} H23 53 1 1 {} {0.615004943109 0.260147008571 0.477737876824} H24 54 1 1 {} {0.509516809051 0.398079992017 0.419279155403} H25 55 1 1 {} {0.527426447127 0.386506360788 0.531352677031} H26 56 1 1 {} {0.511866085819 0.316175208302 0.466152487623} H27 57 1 1 {} {0.506544906032 0.16993283172 0.264097276155} H28 58 1 1 {} {0.506577465769 0.247209749147 0.205370292969} H29 59 1 1 {} {0.495424201463 0.245941319315 0.321503796548} H30 60 1 1 {} {0.594765959368 0.146732218367 0.384313388714} H31 61 1 1 {} {0.593276542026 0.192702279052 0.153737356535} H32 62 1 1 {} {0.676316040427 0.447436367862 0.541511352305} H33 63 1 1 {} {0.686005133218 0.475798288598 0.384196602612} H34 64 1 1 {} {0.617772523989 0.646969521083 0.604908519536} H35 65 1 1 {} {0.628920528698 0.53193116002 0.659958351715} H36 66 1 1 {} {0.565061483123 0.610144072234 0.416609665292} H37 67 1 1 {} {0.631876660996 0.679730674847 0.426934611397} H38 68 1 1 {} {0.609560863602 0.553268067147 0.269269183355} H39 69 1 1 {} {0.657604107168 0.59517727091 0.27504332813} H40 70 1 1 {} {0.719433864367 0.567502896285 0.652492283179} H41 71 1 1 {} {0.715001819553 0.643759700428 0.607516791969} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end