iterations/neb0_image01_iter2.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349265489548 0.559901143488 0.421621588714} C1 1 1 14 {} {0.330227086803 0.526897031154 0.532677418613} Si1 2 1 14 {} {0.404505352942 0.60201765184 0.417436412972} Si2 3 1 8 {} {0.333468090731 0.587170739347 0.607943563647} O1 4 1 8 {} {0.277308588037 0.504910326068 0.52474198448} O2 5 1 6 {} {0.361862799794 0.450932791114 0.568072256779} C2 6 1 6 {} {0.453578007742 0.544417981406 0.411160837021} C3 7 1 8 {} {0.406104790619 0.646439366617 0.512532334427} O3 8 1 8 {} {0.404827319323 0.652907301999 0.329650040712} O4 9 1 14 {} {0.224977087662 0.5105228006 0.555351269196} Si3 10 1 7 {} {0.205327951285 0.431803066514 0.586783562585} N1 11 1 14 {} {0.169291446437 0.427448381307 0.678627565716} Si4 12 1 14 {} {0.220932673085 0.361791683604 0.522847746732} Si5 13 1 7 {} {0.222151131613 0.374157972982 0.409231488613} N2 14 1 7 {} {0.121784982586 0.475783208012 0.671447446858} N3 15 1 1 {} {0.348816867812 0.51946814911 0.371588189696} H1 16 1 1 {} {0.324332732182 0.5970731089 0.399623011835} H2 17 1 1 {} {0.357254800248 0.619303141621 0.594887218872} H3 18 1 1 {} {0.358541805158 0.409934819928 0.519574039597} H4 19 1 1 {} {0.349188003159 0.432876026454 0.63257596147} H5 20 1 1 {} {0.397574682918 0.461910105157 0.576365516685} H6 21 1 1 {} {0.485358032131 0.572066473299 0.410386133476} H7 22 1 1 {} {0.452151649967 0.513827735195 0.35018939295} H8 23 1 1 {} {0.454542137686 0.510255889119 0.468592180825} H9 24 1 1 {} {0.431361794248 0.675744406491 0.522819689112} H10 25 1 1 {} {0.433169321183 0.661715827264 0.300878673408} H11 26 1 1 {} {0.219189254669 0.556168105156 0.633365316795} H12 27 1 1 {} {0.199452905069 0.537066854449 0.47765393526} H13 28 1 1 {} {0.156399850968 0.355752018998 0.686761299017} H14 29 1 1 {} {0.192327217018 0.45178664157 0.760529133822} H15 30 1 1 {} {0.266858269739 0.340102442258 0.547757428407} H16 31 1 1 {} {0.187798396593 0.308373368742 0.543122584459} H17 32 1 1 {} {0.248584172275 0.398159114753 0.381292159673} H18 33 1 1 {} {0.193675879489 0.384823097157 0.375224961947} H19 34 1 1 {} {0.121587048915 0.523368900278 0.695228617721} H20 35 1 1 {} {0.0991115023407 0.469847860372 0.621683208863} H21 36 1 6 {} {0.592696533692 0.322757767176 0.310243746906} C4 37 1 14 {} {0.587919717119 0.356325700552 0.427224284112} Si6 38 1 14 {} {0.576745078681 0.233671171564 0.292334015449} Si7 39 1 8 {} {0.61654615204 0.30725390413 0.495251029301} O5 40 1 8 {} {0.61056817241 0.431363937659 0.432249917449} O6 41 1 6 {} {0.528664148998 0.365026549886 0.463858659747} C5 42 1 6 {} {0.515843224924 0.223067163124 0.268694774339} C6 43 1 8 {} {0.592027440917 0.195040094393 0.3866062891} O7 44 1 8 {} {0.606463484666 0.196675067008 0.21244608705} O8 45 1 14 {} {0.654297424155 0.47621092645 0.460902976614} Si8 46 1 7 {} {0.638802201179 0.557292091433 0.487970107359} N4 47 1 14 {} {0.645056306135 0.584842144685 0.598283544865} Si9 48 1 14 {} {0.61491524666 0.610946711655 0.408508668012} Si10 49 1 7 {} {0.625908637278 0.591902441634 0.29891298585} N5 50 1 7 {} {0.698072118244 0.604653044639 0.634436863899} N6 51 1 1 {} {0.573280880272 0.354526005038 0.264300896057} H22 52 1 1 {} {0.628023781693 0.327903576952 0.290653837377} H23 53 1 1 {} {0.614995115608 0.260113935853 0.477767655818} H24 54 1 1 {} {0.509548293383 0.398002916889 0.419301395521} H25 55 1 1 {} {0.527449429716 0.386506431937 0.531375521804} H26 56 1 1 {} {0.51187712666 0.316117733193 0.466240678106} H27 57 1 1 {} {0.50650651548 0.169963793978 0.264038015516} H28 58 1 1 {} {0.506612798323 0.247249677784 0.205318518449} H29 59 1 1 {} {0.495420845535 0.245995928679 0.32142162735} H30 60 1 1 {} {0.594683876016 0.146693511833 0.384359384072} H31 61 1 1 {} {0.593254262604 0.19266378839 0.153725335767} H32 62 1 1 {} {0.676303463781 0.447396802164 0.541545320611} H33 63 1 1 {} {0.686030119576 0.475782575863 0.384256843665} H34 64 1 1 {} {0.61777820488 0.647099141645 0.605083693613} H35 65 1 1 {} {0.628923680541 0.531926391167 0.660310710888} H36 66 1 1 {} {0.565182118607 0.610032232009 0.416673746978} H37 67 1 1 {} {0.631846759156 0.679722255694 0.427196801411} H38 68 1 1 {} {0.609651754687 0.55315626399 0.269398320191} H39 69 1 1 {} {0.657589763943 0.595213087713 0.275104265056} H40 70 1 1 {} {0.71943977387 0.567499710844 0.652491994153} H41 71 1 1 {} {0.715018394317 0.643806319325 0.607373626408} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end