iterations/neb0_image01_iter22.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349254966801 0.559834304092 0.421626908476} C1 1 1 14 {} {0.33015781124 0.526790588871 0.532672000624} Si1 2 1 14 {} {0.404469347096 0.602020608124 0.417358517251} Si2 3 1 8 {} {0.333491512564 0.587084512179 0.607915175198} O1 4 1 8 {} {0.277260660969 0.504970584933 0.524670290513} O2 5 1 6 {} {0.361860904037 0.450879020692 0.568101242751} C2 6 1 6 {} {0.453587361607 0.544429348508 0.411154785072} C3 7 1 8 {} {0.406155507983 0.646254888902 0.512566210637} O3 8 1 8 {} {0.404810649568 0.653213105502 0.329816059566} O4 9 1 14 {} {0.224880501347 0.510454360688 0.555317597515} Si3 10 1 7 {} {0.205322220254 0.431721118553 0.586792833374} N1 11 1 14 {} {0.169305913281 0.427493303776 0.678679970353} Si4 12 1 14 {} {0.220925891779 0.361755417077 0.522747566817} Si5 13 1 7 {} {0.222129854361 0.374370982384 0.409216125942} N2 14 1 7 {} {0.12180200737 0.475851705184 0.671562457032} N3 15 1 1 {} {0.348829072765 0.519407288181 0.371571052832} H1 16 1 1 {} {0.324280306702 0.596956924082 0.39963351321} H2 17 1 1 {} {0.357242885067 0.619253240263 0.594846619095} H3 18 1 1 {} {0.358543426531 0.409864307413 0.519623829641} H4 19 1 1 {} {0.349216505202 0.432816096782 0.632628568222} H5 20 1 1 {} {0.397570011912 0.461897638299 0.576358534533} H6 21 1 1 {} {0.485368051746 0.572045523932 0.410418299675} H7 22 1 1 {} {0.452218827004 0.513803598725 0.350235739478} H8 23 1 1 {} {0.454543036432 0.510247543667 0.468588127079} H9 24 1 1 {} {0.431291979885 0.675782895275 0.522782018579} H10 25 1 1 {} {0.433137257807 0.661665285957 0.300802379928} H11 26 1 1 {} {0.219202754973 0.556150734501 0.633316098609} H12 27 1 1 {} {0.199449626364 0.537088380746 0.477560670021} H13 28 1 1 {} {0.156446722639 0.355789767707 0.686850185478} H14 29 1 1 {} {0.192376745888 0.451854996873 0.76054837192} H15 30 1 1 {} {0.266862013744 0.340065362864 0.547649756562} H16 31 1 1 {} {0.187796047505 0.308344170207 0.543109324728} H17 32 1 1 {} {0.248609370417 0.398193263647 0.381200295974} H18 33 1 1 {} {0.193643639307 0.384887674614 0.375169208639} H19 34 1 1 {} {0.121623554845 0.523475026969 0.69520728533} H20 35 1 1 {} {0.0991481243786 0.469845226962 0.621761228686} H21 36 1 6 {} {0.592707070788 0.322796865545 0.310231612626} C4 37 1 14 {} {0.587906742266 0.356333891666 0.427216583345} Si6 38 1 14 {} {0.576743776483 0.233704616038 0.292342796013} Si7 39 1 8 {} {0.616520609394 0.307273169011 0.495265939835} O5 40 1 8 {} {0.610573593666 0.43140843042 0.432218206779} O6 41 1 6 {} {0.528651294029 0.365111551972 0.463797103637} C5 42 1 6 {} {0.515845747242 0.223053476408 0.268768550529} C6 43 1 8 {} {0.592091627297 0.195083983857 0.386573502366} O7 44 1 8 {} {0.606447235786 0.196668420168 0.212492332384} O8 45 1 14 {} {0.654316034419 0.476188681325 0.460900305876} Si8 46 1 7 {} {0.638801917217 0.557268402859 0.487943609929} N4 47 1 14 {} {0.645242322939 0.584901835426 0.598378004402} Si9 48 1 14 {} {0.614828542678 0.610899001423 0.408954947729} Si10 49 1 7 {} {0.626047456125 0.591423411933 0.299455188123} N5 50 1 7 {} {0.698069548227 0.604741683894 0.634905483102} N6 51 1 1 {} {0.573283433592 0.354553891468 0.264279358462} H22 52 1 1 {} {0.62803431605 0.327901593938 0.290639981075} H23 53 1 1 {} {0.615008904478 0.260142478072 0.477716713559} H24 54 1 1 {} {0.509507598986 0.398111707304 0.41927734789} H25 55 1 1 {} {0.52741598449 0.386509383437 0.531344774489} H26 56 1 1 {} {0.511860254424 0.316201995277 0.466109814932} H27 57 1 1 {} {0.506563617666 0.169918892635 0.264126770108} H28 58 1 1 {} {0.506560444679 0.24719263548 0.205395695588} H29 59 1 1 {} {0.495424403629 0.245916802749 0.321543897733} H30 60 1 1 {} {0.594805842517 0.146745501775 0.384289775975} H31 61 1 1 {} {0.593281384153 0.192719849491 0.153718080094} H32 62 1 1 {} {0.67632319834 0.447452017814 0.541496010649} H33 63 1 1 {} {0.685996684073 0.475805123582 0.384164617389} H34 64 1 1 {} {0.617768828486 0.646926174589 0.60483055306} H35 65 1 1 {} {0.628915438853 0.531908284286 0.659833941607} H36 66 1 1 {} {0.565022534235 0.610193396996 0.416593279975} H37 67 1 1 {} {0.631885586695 0.679721630128 0.42682586444} H38 68 1 1 {} {0.60951749079 0.553345860034 0.269241351568} H39 69 1 1 {} {0.657525059896 0.595160082364 0.275108840935} H40 70 1 1 {} {0.719475522947 0.567450633569 0.652520977769} H41 71 1 1 {} {0.715046844084 0.643832139407 0.607525627833} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end