iterations/neb0_image01_iter23.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349256987486 0.559834657656 0.421619164927} C1 1 1 14 {} {0.330159392134 0.526788286828 0.532667791512} Si1 2 1 14 {} {0.404466420181 0.602016471714 0.417361461181} Si2 3 1 8 {} {0.333494522535 0.587090035788 0.607919017598} O1 4 1 8 {} {0.277258427523 0.504969663532 0.524669181196} O2 5 1 6 {} {0.361859157497 0.450875071109 0.568101465392} C2 6 1 6 {} {0.45358563423 0.544428909459 0.411151637699} C3 7 1 8 {} {0.406157692359 0.646256342472 0.512577053758} O3 8 1 8 {} {0.404817593164 0.65321769692 0.329819149075} O4 9 1 14 {} {0.224884018918 0.510451661334 0.555314400839} Si3 10 1 7 {} {0.205321405331 0.431725653578 0.586791539283} N1 11 1 14 {} {0.169307279101 0.427497479928 0.678680700818} Si4 12 1 14 {} {0.220924220244 0.361759366872 0.522746616229} Si5 13 1 7 {} {0.222133234672 0.374374440101 0.409217985796} N2 14 1 7 {} {0.121806019587 0.475856365777 0.671570974796} N3 15 1 1 {} {0.348828898038 0.519405760537 0.371572083409} H1 16 1 1 {} {0.324279770257 0.596951410047 0.399634490245} H2 17 1 1 {} {0.357239335541 0.619244693459 0.594845471822} H3 18 1 1 {} {0.358543811827 0.409862034141 0.519626667539} H4 19 1 1 {} {0.349217413839 0.432814221231 0.632629835179} H5 20 1 1 {} {0.39756870425 0.461897968436 0.576357354312} H6 21 1 1 {} {0.485370244933 0.572048278175 0.410420445963} H7 22 1 1 {} {0.452220612715 0.513799789744 0.350230546214} H8 23 1 1 {} {0.454541506438 0.510250025575 0.468588059499} H9 24 1 1 {} {0.43128748615 0.675781107889 0.522778403003} H10 25 1 1 {} {0.433129839727 0.661662474805 0.300804721653} H11 26 1 1 {} {0.219201087398 0.556149306333 0.63331489168} H12 27 1 1 {} {0.199447026106 0.537087928175 0.477557936719} H13 28 1 1 {} {0.156446627575 0.355788210155 0.686855433295} H14 29 1 1 {} {0.192378201703 0.451856848084 0.760548234717} H15 30 1 1 {} {0.266862081823 0.340063503209 0.547644696367} H16 31 1 1 {} {0.187795985009 0.308341694267 0.543106133817} H17 32 1 1 {} {0.248605793092 0.398192529326 0.381199207846} H18 33 1 1 {} {0.19364254465 0.384892262798 0.375163727155} H19 34 1 1 {} {0.121624886441 0.523472073132 0.695203022171} H20 35 1 1 {} {0.099147480769 0.469846355539 0.621761847659} H21 36 1 6 {} {0.592705950251 0.322797657317 0.310231808585} C4 37 1 14 {} {0.587907451769 0.356336900128 0.42721394892} Si6 38 1 14 {} {0.57674382333 0.233706536651 0.292342910903} Si7 39 1 8 {} {0.616518764668 0.307282400239 0.495267671908} O5 40 1 8 {} {0.610573152005 0.431407315111 0.432219522658} O6 41 1 6 {} {0.5286493756 0.365113247009 0.463792634314} C5 42 1 6 {} {0.515844753252 0.223050882336 0.268771350004} C6 43 1 8 {} {0.592093210269 0.195088094058 0.386574693998} O7 44 1 8 {} {0.606449880056 0.19666828145 0.212500081471} O8 45 1 14 {} {0.654315443961 0.476194231592 0.460894208823} Si8 46 1 7 {} {0.6387996158 0.557269504891 0.487920203411} N4 47 1 14 {} {0.645271917906 0.584916489767 0.598387879556} Si9 48 1 14 {} {0.614812045129 0.61090450948 0.409011978322} Si10 49 1 7 {} {0.626067936571 0.591417511005 0.29941799944} N5 50 1 7 {} {0.698045679671 0.604728344911 0.63490974233} N6 51 1 1 {} {0.573284234037 0.354554823165 0.264279531875} H22 52 1 1 {} {0.628034907059 0.327902544496 0.290639549274} H23 53 1 1 {} {0.615009089503 0.260136562607 0.477712763421} H24 54 1 1 {} {0.509508286825 0.39811444596 0.419278212393} H25 55 1 1 {} {0.527415071424 0.386511177151 0.531346082664} H26 56 1 1 {} {0.511859220338 0.316203928133 0.466105314456} H27 57 1 1 {} {0.506565614702 0.16991871587 0.264130253758} H28 58 1 1 {} {0.506559127644 0.247190956404 0.205400447512} H29 59 1 1 {} {0.4954245553 0.24591427765 0.321546867171} H30 60 1 1 {} {0.594810184579 0.146744450993 0.384287252478} H31 61 1 1 {} {0.593280086978 0.19272140437 0.153708488971} H32 62 1 1 {} {0.676325494724 0.447450232574 0.5414986168} H33 63 1 1 {} {0.685996680059 0.475805433411 0.384162698268} H34 64 1 1 {} {0.617764957458 0.646934422649 0.604827737702} H35 65 1 1 {} {0.628911070583 0.531890432509 0.659846958112} H36 66 1 1 {} {0.565034497321 0.610196411763 0.416593467891} H37 67 1 1 {} {0.631885659076 0.679717894316 0.426819825249} H38 68 1 1 {} {0.609501448862 0.553332972948 0.269225973517} H39 69 1 1 {} {0.657520496779 0.595160818985 0.275119394365} H40 70 1 1 {} {0.719477679127 0.567454972863 0.652519492246} H41 71 1 1 {} {0.715053257434 0.643836931316 0.607529378123} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end