iterations/neb0_image01_iter27.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349262958763 0.559844936515 0.421599464097} C1 1 1 14 {} {0.330192579812 0.526807945471 0.532660171392} Si1 2 1 14 {} {0.404464863266 0.602012690655 0.417379581382} Si2 3 1 8 {} {0.333479397857 0.587083704246 0.6079364929} O1 4 1 8 {} {0.277228655515 0.504952348289 0.524682376452} O2 5 1 6 {} {0.361853740113 0.450871119108 0.568101704057} C2 6 1 6 {} {0.453580177161 0.544427327646 0.411140125191} C3 7 1 8 {} {0.406142604421 0.646264195782 0.512596179507} O3 8 1 8 {} {0.40481738186 0.653180099303 0.329844356269} O4 9 1 14 {} {0.224925439357 0.510463498261 0.555294104751} Si3 10 1 7 {} {0.205318712751 0.43175228229 0.58678413856} N1 11 1 14 {} {0.169311817107 0.427500430545 0.678691698457} Si4 12 1 14 {} {0.22092508955 0.361765392353 0.522757069302} Si5 13 1 7 {} {0.222127301785 0.374358987192 0.409221832668} N2 14 1 7 {} {0.121806883704 0.475846576649 0.671551202502} N3 15 1 1 {} {0.348827164633 0.519406786983 0.371575159074} H1 16 1 1 {} {0.324285206667 0.596947672616 0.399635396562} H2 17 1 1 {} {0.357248680511 0.619248586703 0.594836580509} H3 18 1 1 {} {0.358544919753 0.409861219501 0.519627987549} H4 19 1 1 {} {0.349216760132 0.432815130083 0.632627966308} H5 20 1 1 {} {0.397563213124 0.46190050455 0.576353307986} H6 21 1 1 {} {0.485374647205 0.572059235418 0.410423014226} H7 22 1 1 {} {0.452218132447 0.513790304976 0.350206772486} H8 23 1 1 {} {0.454536044114 0.510258075062 0.468590467306} H9 24 1 1 {} {0.431295097832 0.675786099471 0.522776318886} H10 25 1 1 {} {0.433133352244 0.661666229499 0.300797490279} H11 26 1 1 {} {0.219192677191 0.556145353132 0.633318127933} H12 27 1 1 {} {0.199437872905 0.537081260439 0.477562768015} H13 28 1 1 {} {0.156439668666 0.355779750707 0.686861435943} H14 29 1 1 {} {0.192377733583 0.451853902971 0.760541860617} H15 30 1 1 {} {0.266859038677 0.340064636552 0.547642227404} H16 31 1 1 {} {0.187796320124 0.30833949114 0.543094524373} H17 32 1 1 {} {0.248598407363 0.398191526777 0.381199487868} H18 33 1 1 {} {0.193652569722 0.384896173624 0.375162615719} H19 34 1 1 {} {0.121625278425 0.523465630775 0.695201510329} H20 35 1 1 {} {0.0991482348022 0.469852403679 0.621772331228} H21 36 1 6 {} {0.592700598548 0.322789415517 0.310235381673} C4 37 1 14 {} {0.587914441009 0.356371820994 0.427192810095} Si6 38 1 14 {} {0.576741246854 0.233721502159 0.292345808621} Si7 39 1 8 {} {0.61651805949 0.307273945822 0.495271886043} O5 40 1 8 {} {0.610560942462 0.431375480906 0.432229341491} O6 41 1 6 {} {0.528646252966 0.365104740334 0.463797664969} C5 42 1 6 {} {0.515841556492 0.223045182806 0.268771099355} C6 43 1 8 {} {0.592091433264 0.195084198079 0.386587787352} O7 44 1 8 {} {0.606456213889 0.196661302772 0.212479185136} O8 45 1 14 {} {0.654311637544 0.476242845304 0.460859115085} Si8 46 1 7 {} {0.638812577297 0.557278318598 0.487941020602} N4 47 1 14 {} {0.64523711322 0.584895625021 0.598316901126} Si9 48 1 14 {} {0.614803783172 0.610903506465 0.408936943804} Si10 49 1 7 {} {0.625990911499 0.591511083751 0.299454630645} N5 50 1 7 {} {0.698133840738 0.604740119058 0.634846026455} N6 51 1 1 {} {0.573286261517 0.354556440402 0.264281713902} H22 52 1 1 {} {0.628034801511 0.327907133558 0.290640751437} H23 53 1 1 {} {0.615008415917 0.260140677315 0.477715486874} H24 54 1 1 {} {0.509514064899 0.39811429017 0.419277869793} H25 55 1 1 {} {0.527416456416 0.386515903858 0.531349937932} H26 56 1 1 {} {0.511856983777 0.316198910984 0.466106340953} H27 57 1 1 {} {0.506564303423 0.169921462031 0.264130715963} H28 58 1 1 {} {0.506561716744 0.247192022033 0.205408481661} H29 59 1 1 {} {0.495425135095 0.245915403851 0.321541059805} H30 60 1 1 {} {0.59480920994 0.146742949331 0.384288278612} H31 61 1 1 {} {0.593279555111 0.192722198556 0.153709589545} H32 62 1 1 {} {0.676331768542 0.447436062671 0.541517274166} H33 63 1 1 {} {0.686002091414 0.475801044228 0.384172480406} H34 64 1 1 {} {0.617760075418 0.646985537503 0.604861407985} H35 65 1 1 {} {0.628904459508 0.531843787234 0.659959271192} H36 66 1 1 {} {0.565089896012 0.610184964804 0.416612284028} H37 67 1 1 {} {0.631880626212 0.679712678658 0.426865336512} H38 68 1 1 {} {0.609463797365 0.553237932408 0.269176422974} H39 69 1 1 {} {0.657613549274 0.595172370007 0.275072059933} H40 70 1 1 {} {0.719439246666 0.567533448444 0.652488665115} H41 71 1 1 {} {0.71502031955 0.643750485333 0.607597417009} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end