iterations/neb0_image01_iter4.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349277463848 0.559908138976 0.421619114841} C1 1 1 14 {} {0.330186134533 0.526860463315 0.532670032704} Si1 2 1 14 {} {0.404465797814 0.602012567022 0.417429318124} Si2 3 1 8 {} {0.333477378871 0.58717527486 0.607944602227} O1 4 1 8 {} {0.277334305379 0.504928689195 0.524729626751} O2 5 1 6 {} {0.361872113655 0.450928846414 0.568078097211} C2 6 1 6 {} {0.453588609422 0.544423350927 0.411160406626} C3 7 1 8 {} {0.406120300821 0.646424868502 0.512521809007} O3 8 1 8 {} {0.404829368431 0.652938677027 0.329654692343} O4 9 1 14 {} {0.224943273948 0.51048041724 0.555373880946} Si3 10 1 7 {} {0.205333962756 0.43180332057 0.586782078406} N1 11 1 14 {} {0.169291416113 0.427472477347 0.678609714329} Si4 12 1 14 {} {0.220927935356 0.361801813848 0.522818315799} Si5 13 1 7 {} {0.222152227002 0.37417495576 0.409231180171} N2 14 1 7 {} {0.121783385056 0.475794237796 0.671467984811} N3 15 1 1 {} {0.348817501124 0.519465625811 0.371590572868} H1 16 1 1 {} {0.324332546412 0.597061686781 0.399626601023} H2 17 1 1 {} {0.357252278978 0.619303390887 0.594890566499} H3 18 1 1 {} {0.35854002874 0.409932371202 0.519576862897} H4 19 1 1 {} {0.349189133229 0.43287363506 0.632576597957} H5 20 1 1 {} {0.397575389323 0.461907064302 0.576366857618} H6 21 1 1 {} {0.485361034059 0.572063211392 0.410386512427} H7 22 1 1 {} {0.452155266275 0.513827053437 0.350193421853} H8 23 1 1 {} {0.454543357823 0.510245182609 0.468603077595} H9 24 1 1 {} {0.431353722443 0.675747110485 0.522822864963} H10 25 1 1 {} {0.433168512767 0.661714337607 0.300870246459} H11 26 1 1 {} {0.219194034799 0.556172249301 0.633359731453} H12 27 1 1 {} {0.199457020438 0.537073390383 0.477643781323} H13 28 1 1 {} {0.156403715009 0.355745276141 0.686768157169} H14 29 1 1 {} {0.192329761606 0.451790524528 0.760536233935} H15 30 1 1 {} {0.266859698579 0.340097844922 0.547750264104} H16 31 1 1 {} {0.18779899899 0.308371510311 0.543126957084} H17 32 1 1 {} {0.248583264552 0.398158871358 0.38129320626} H18 33 1 1 {} {0.193676159923 0.384824775969 0.375230658587} H19 34 1 1 {} {0.121591359904 0.523372264538 0.695226890999} H20 35 1 1 {} {0.099114905322 0.46984374733 0.62168515665} H21 36 1 6 {} {0.592701738944 0.322766744114 0.310252208039} C4 37 1 14 {} {0.587910767604 0.35629183126 0.42721190122} Si6 38 1 14 {} {0.5767348348 0.233675861111 0.292332558883} Si7 39 1 8 {} {0.616546249306 0.307254304727 0.495254278738} O5 40 1 8 {} {0.610574887386 0.431395664553 0.432238118601} O6 41 1 6 {} {0.528672380252 0.365033108451 0.463870708905} C5 42 1 6 {} {0.515844650153 0.223075619001 0.26869948009} C6 43 1 8 {} {0.592034157383 0.195042698775 0.386604362217} O7 44 1 8 {} {0.606465863613 0.196674371559 0.212456352339} O8 45 1 14 {} {0.654305883012 0.476196046599 0.460959864983} Si8 46 1 7 {} {0.638754717277 0.557279697588 0.487681193401} N4 47 1 14 {} {0.645247960355 0.584949477928 0.598459626836} Si9 48 1 14 {} {0.614845895899 0.610949511287 0.409001237931} Si10 49 1 7 {} {0.625959050786 0.591839883941 0.298811562302} N5 50 1 7 {} {0.698000619961 0.604623198862 0.634445031801} N6 51 1 1 {} {0.573279235471 0.354526793556 0.264295646597} H22 52 1 1 {} {0.628024201 0.32790196912 0.290652824034} H23 53 1 1 {} {0.614995956972 0.260119164904 0.477763990512} H24 54 1 1 {} {0.509537950532 0.398018854437 0.419286749879} H25 55 1 1 {} {0.527446059055 0.386504373255 0.531370985096} H26 56 1 1 {} {0.511875536706 0.316120909453 0.4662310341} H27 57 1 1 {} {0.506509944291 0.169958877749 0.264043502466} H28 58 1 1 {} {0.506610020378 0.247241963688 0.205328786976} H29 59 1 1 {} {0.495423520315 0.245986864277 0.321425361632} H30 60 1 1 {} {0.594692459442 0.146695885558 0.384355967924} H31 61 1 1 {} {0.593254554188 0.192666392795 0.15371741118} H32 62 1 1 {} {0.676302296324 0.447401696603 0.541528228377} H33 63 1 1 {} {0.686023241626 0.475790039873 0.38424469254} H34 64 1 1 {} {0.617758533451 0.647090876811 0.605055409262} H35 65 1 1 {} {0.628908654974 0.531911436759 0.660263950416} H36 66 1 1 {} {0.565194169656 0.610043621274 0.41663517291} H37 67 1 1 {} {0.631855991248 0.679722849642 0.427128213334} H38 68 1 1 {} {0.609622962385 0.553139818359 0.269342088089} H39 69 1 1 {} {0.657612753325 0.595215602611 0.275060042422} H40 70 1 1 {} {0.719419709508 0.567533032331 0.652464062469} H41 71 1 1 {} {0.71500319869 0.643768061346 0.607397631132} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end