iterations/neb0_image01_iter5.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349275058393 0.559905800909 0.421620393153} C1 1 1 14 {} {0.330191185479 0.526863042076 0.532671135311} Si1 2 1 14 {} {0.404468034817 0.602013509861 0.417426191923} Si2 3 1 8 {} {0.333475941315 0.587171088822 0.60794320328} O1 4 1 8 {} {0.27732362371 0.504927484567 0.524731063294} O2 5 1 6 {} {0.361871251107 0.450928114795 0.568078231644} C2 6 1 6 {} {0.453586787584 0.544423287901 0.411161897818} C3 7 1 8 {} {0.406119617196 0.646421564716 0.512521280625} O3 8 1 8 {} {0.404827851515 0.652941750659 0.329657441824} O4 9 1 14 {} {0.22494720658 0.510483822869 0.555369598502} Si3 10 1 7 {} {0.205333669103 0.431800846954 0.586782443476} N1 11 1 14 {} {0.169291815655 0.427471253777 0.678614173887} Si4 12 1 14 {} {0.220929219521 0.361797488548 0.522817391704} Si5 13 1 7 {} {0.222151051087 0.374177828339 0.409231100395} N2 14 1 7 {} {0.121782690255 0.47579400884 0.671466693752} N3 15 1 1 {} {0.348817867104 0.519465796093 0.371590923397} H1 16 1 1 {} {0.32433238304 0.597060377015 0.399626794355} H2 17 1 1 {} {0.35725352995 0.619304814516 0.594889496355} H3 18 1 1 {} {0.358540111067 0.409931888755 0.519577505382} H4 19 1 1 {} {0.349189518564 0.432873078287 0.632576992533} H5 20 1 1 {} {0.397576031457 0.461907145343 0.576366963955} H6 21 1 1 {} {0.485362103655 0.572063594042 0.410386515055} H7 22 1 1 {} {0.452156044156 0.513826962249 0.350193988453} H8 23 1 1 {} {0.45454363537 0.510244828891 0.468602880317} H9 24 1 1 {} {0.431354083755 0.675748594048 0.522822906423} H10 25 1 1 {} {0.433169160324 0.661713904687 0.300869012713} H11 26 1 1 {} {0.219194314808 0.556171700322 0.633359047637} H12 27 1 1 {} {0.199457367754 0.537073197242 0.477643430065} H13 28 1 1 {} {0.156404339175 0.355746499188 0.686768417947} H14 29 1 1 {} {0.192330222407 0.451791052784 0.760535373806} H15 30 1 1 {} {0.266858985199 0.340098258768 0.547749414699} H16 31 1 1 {} {0.187799136906 0.308372161874 0.543126810659} H17 32 1 1 {} {0.248584356866 0.398159511875 0.381291715921} H18 33 1 1 {} {0.193675692502 0.384825139247 0.375230136313} H19 34 1 1 {} {0.121591715701 0.523375254774 0.695227969374} H20 35 1 1 {} {0.0991153480895 0.469843538411 0.621686121771} H21 36 1 6 {} {0.592700999392 0.322765690556 0.310250892317} C4 37 1 14 {} {0.587913156923 0.356299230284 0.427210976135} Si6 38 1 14 {} {0.576735369352 0.233678018069 0.292333248113} Si7 39 1 8 {} {0.616546351888 0.307253178031 0.495255640463} O5 40 1 8 {} {0.610572667597 0.431389072724 0.432238461265} O6 41 1 6 {} {0.528670897528 0.365033794397 0.463867891866} C5 42 1 6 {} {0.515844272156 0.223074014956 0.268699895963} C6 43 1 8 {} {0.5920347283 0.19504284813 0.386603813994} O7 44 1 8 {} {0.60646520589 0.196673847653 0.21245477344} O8 45 1 14 {} {0.654304891686 0.47620073149 0.460948840927} Si8 46 1 7 {} {0.638761827963 0.557278024763 0.487724923215} N4 47 1 14 {} {0.645229983581 0.584936332714 0.598429498832} Si9 48 1 14 {} {0.614849254855 0.610945614562 0.408955518816} Si10 49 1 7 {} {0.62594872837 0.591846767182 0.298855819463} N5 50 1 7 {} {0.698021537548 0.604632015495 0.634452673354} N6 51 1 1 {} {0.573279450385 0.354526871063 0.264295987664} H22 52 1 1 {} {0.628024513091 0.327902080315 0.290652850364} H23 53 1 1 {} {0.614996161164 0.260119294687 0.477763614318} H24 54 1 1 {} {0.509538048823 0.398019169311 0.41928746035} H25 55 1 1 {} {0.527445788422 0.38650470537 0.531372098368} H26 56 1 1 {} {0.511875454685 0.316122011362 0.466230025841} H27 57 1 1 {} {0.50651063079 0.169959373251 0.264044384032} H28 58 1 1 {} {0.5066095217 0.247241522709 0.205329202681} H29 59 1 1 {} {0.495423577887 0.245986214434 0.321426744157} H30 60 1 1 {} {0.59469361626 0.146696234447 0.384355430211} H31 61 1 1 {} {0.593255280756 0.192667037593 0.153719285259} H32 62 1 1 {} {0.676303228723 0.447401804683 0.541531872535} H33 63 1 1 {} {0.686022717016 0.475789414211 0.384246447468} H34 64 1 1 {} {0.61775975568 0.647088117092 0.60505420293} H35 65 1 1 {} {0.628910047134 0.531914437438 0.660256958658} H36 66 1 1 {} {0.565189298019 0.610045875522 0.416635737746} H37 67 1 1 {} {0.631856669737 0.67972534905 0.427127004243} H38 68 1 1 {} {0.609622143553 0.55313803401 0.269338227527} H39 69 1 1 {} {0.657619004252 0.595213937061 0.275053409819} H40 70 1 1 {} {0.719416957461 0.567535712214 0.652463666296} H41 71 1 1 {} {0.714999279215 0.643761757499 0.607404174754} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end