iterations/neb0_image01_iter6.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349260497578 0.559890410091 0.421629267892} C1 1 1 14 {} {0.330216745181 0.526872207098 0.532676741611} Si1 2 1 14 {} {0.404475037609 0.602019046538 0.417401616187} Si2 3 1 8 {} {0.33346837421 0.587142721142 0.607933428633} O1 4 1 8 {} {0.277254965308 0.504923695271 0.524737734487} O2 5 1 6 {} {0.361867362321 0.450921864583 0.568080745462} C2 6 1 6 {} {0.453576405355 0.544424358671 0.411172394437} C3 7 1 8 {} {0.406118710219 0.646394259405 0.512515402604} O3 8 1 8 {} {0.404817702302 0.652972245004 0.32967805262} O4 9 1 14 {} {0.224965641317 0.51049632974 0.555345788745} Si3 10 1 7 {} {0.205332803698 0.431782830605 0.586784468666} N1 11 1 14 {} {0.169294622112 0.4274695057 0.678639581147} Si4 12 1 14 {} {0.220936886245 0.361770665875 0.522802921851} Si5 13 1 7 {} {0.222143334588 0.374203489958 0.409230377474} N2 14 1 7 {} {0.121777779389 0.47579597765 0.671463458384} N3 15 1 1 {} {0.348820696819 0.519466159214 0.371593867747} H1 16 1 1 {} {0.324330930529 0.597048081658 0.399629002781} H2 17 1 1 {} {0.357261446219 0.619314419753 0.594882703127} H3 18 1 1 {} {0.358540280158 0.409927580643 0.519582754348} H4 19 1 1 {} {0.349192567791 0.432868281337 0.632580264654} H5 20 1 1 {} {0.397580733764 0.461906946616 0.576367937085} H6 21 1 1 {} {0.485370292451 0.572065314191 0.410386641395} H7 22 1 1 {} {0.452162662252 0.513826109131 0.350199236057} H8 23 1 1 {} {0.454545943719 0.510239597685 0.468604078872} H9 24 1 1 {} {0.431354275497 0.675759550015 0.522823688909} H10 25 1 1 {} {0.433173186915 0.661710162625 0.300858418078} H11 26 1 1 {} {0.219197505358 0.556168633078 0.633352443966} H12 27 1 1 {} {0.199460892014 0.537073404398 0.477638234659} H13 28 1 1 {} {0.15640995481 0.35575371069 0.686772069174} H14 29 1 1 {} {0.192334090974 0.451795941324 0.760531053212} H15 30 1 1 {} {0.266854189046 0.340099919304 0.547740930936} H16 31 1 1 {} {0.187800302045 0.308376414968 0.543126834811} H17 32 1 1 {} {0.248591261937 0.39816357612 0.38128198424} H18 33 1 1 {} {0.193672791546 0.384828127233 0.375228211907} H19 34 1 1 {} {0.121595421638 0.523396335666 0.695234379451} H20 35 1 1 {} {0.099119688149 0.46984105569 0.621694316071} H21 36 1 6 {} {0.592697054592 0.322760327939 0.310243460549} C4 37 1 14 {} {0.587927992073 0.356343409164 0.427201485613} Si6 38 1 14 {} {0.576736851938 0.233694575522 0.292337642327} Si7 39 1 8 {} {0.616546978349 0.307245592785 0.495266334187} O5 40 1 8 {} {0.610558856189 0.431350455122 0.432238467288} O6 41 1 6 {} {0.528662379056 0.365040528881 0.463850626271} C5 42 1 6 {} {0.515841899783 0.223064729399 0.268704225245} C6 43 1 8 {} {0.592040571963 0.195044650177 0.386599349408} O7 44 1 8 {} {0.606461054104 0.196670031721 0.2124469619} O8 45 1 14 {} {0.654299656163 0.47622941914 0.460882142176} Si8 46 1 7 {} {0.63880198719 0.557263004947 0.487969941576} N4 47 1 14 {} {0.645146641061 0.584868153455 0.598256605178} Si9 48 1 14 {} {0.614855761991 0.610921540423 0.408751016458} Si10 49 1 7 {} {0.625890784052 0.591876060543 0.299141965433} N5 50 1 7 {} {0.698149015601 0.604686134721 0.634510926186} N6 51 1 1 {} {0.573280579156 0.354527757382 0.264297072716} H22 52 1 1 {} {0.628026826531 0.327902482876 0.29065277697} H23 53 1 1 {} {0.614997857981 0.260121291323 0.477759764209} H24 54 1 1 {} {0.509536105926 0.398025621142 0.419288839262} H25 55 1 1 {} {0.527442964403 0.386506578785 0.531378777178} H26 56 1 1 {} {0.511874392475 0.316130728174 0.46622010417} H27 57 1 1 {} {0.506516496198 0.169961439771 0.264052178398} H28 58 1 1 {} {0.506605167709 0.247236349236 0.205334860627} H29 59 1 1 {} {0.495424625726 0.245979182218 0.321437836441} H30 60 1 1 {} {0.59470429324 0.146699361413 0.384350457475} H31 61 1 1 {} {0.593260464154 0.19267230853 0.153730059742} H32 62 1 1 {} {0.676309672475 0.447403823817 0.541553706049} H33 63 1 1 {} {0.686017344159 0.475786718294 0.384255694876} H34 64 1 1 {} {0.617764018231 0.647066009547 0.605038806578} H35 65 1 1 {} {0.628916686033 0.531932542186 0.660195087589} H36 66 1 1 {} {0.565156636203 0.610064903001 0.41663082484} H37 67 1 1 {} {0.631863942745 0.67974329785 0.427101413435} H38 68 1 1 {} {0.609609337338 0.553123521512 0.269298083709} H39 69 1 1 {} {0.657665816692 0.595202875715 0.274997665875} H40 70 1 1 {} {0.719395075544 0.567559145073 0.652456302438} H41 71 1 1 {} {0.714970198744 0.643712839364 0.607453814926} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end