iterations/neb0_image01_iter7.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image01 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.349258214978 0.559886789028 0.421631624546} C1 1 1 14 {} {0.33021594343 0.526867623209 0.53267661702} Si1 2 1 14 {} {0.40447032661 0.602019718571 0.417392753502} Si2 3 1 8 {} {0.33346847947 0.587135977672 0.607930580831} O1 4 1 8 {} {0.277241217355 0.504926194322 0.524736830292} O2 5 1 6 {} {0.361867893192 0.450919215207 0.568082569648} C2 6 1 6 {} {0.45357537073 0.544425750321 0.411175325655} C3 7 1 8 {} {0.406121653779 0.64638366334 0.512512308331} O3 8 1 8 {} {0.404815451973 0.652987926888 0.329684726} O4 9 1 14 {} {0.224963845935 0.510492826734 0.55534323441} Si3 10 1 7 {} {0.205333543876 0.431777134231 0.586784898576} N1 11 1 14 {} {0.169295427945 0.427473196546 0.678643877291} Si4 12 1 14 {} {0.220938221832 0.361764394738 0.522793365948} Si5 13 1 7 {} {0.222141547425 0.374214777091 0.409230116517} N2 14 1 7 {} {0.121776387409 0.475799209571 0.671467205296} N3 15 1 1 {} {0.348821681894 0.519465593165 0.371595043913} H1 16 1 1 {} {0.324330212786 0.597042240706 0.399630255382} H2 17 1 1 {} {0.357262690308 0.619316340079 0.594881482563} H3 18 1 1 {} {0.358540025247 0.40992565629 0.519584899355} H4 19 1 1 {} {0.349193731515 0.432866254033 0.63258158852} H5 20 1 1 {} {0.397582160205 0.461906292621 0.576368417884} H6 21 1 1 {} {0.485373058973 0.572065021863 0.410386839308} H7 22 1 1 {} {0.452165449275 0.513825734356 0.350201783568} H8 23 1 1 {} {0.45454684753 0.510236162433 0.468606285239} H9 24 1 1 {} {0.431352293243 0.675762853156 0.522824173898} H10 25 1 1 {} {0.433173645281 0.661708477949 0.300854135572} H11 26 1 1 {} {0.219199310431 0.556168317288 0.633349322602} H12 27 1 1 {} {0.199462615981 0.537074630531 0.47763475403} H13 28 1 1 {} {0.156412431477 0.355754844156 0.686774611343} H14 29 1 1 {} {0.192335852106 0.451798315241 0.760531155554} H15 30 1 1 {} {0.266853098726 0.340099487393 0.547736901515} H16 31 1 1 {} {0.187800731303 0.308377239514 0.543127569543} H17 32 1 1 {} {0.248593104162 0.398164708539 0.381279122886} H18 33 1 1 {} {0.193671638208 0.384829564804 0.375228207745} H19 34 1 1 {} {0.121597348147 0.523403037346 0.695235666288} H20 35 1 1 {} {0.0991214330149 0.469839533468 0.621696772267} H21 36 1 6 {} {0.592696934928 0.322760534803 0.310242625276} C4 37 1 14 {} {0.587930591438 0.356349369333 0.427196991403} Si6 38 1 14 {} {0.576735643665 0.233700027482 0.29233860425} Si7 39 1 8 {} {0.616546990584 0.307244090799 0.495269922408} O5 40 1 8 {} {0.610556609004 0.431345935585 0.432236610162} O6 41 1 6 {} {0.528661361432 0.365044019773 0.4638475206} C5 42 1 6 {} {0.515841490704 0.223063596346 0.268706576952} C6 43 1 8 {} {0.592043628003 0.195045838781 0.386597435789} O7 44 1 8 {} {0.606460245647 0.196668931122 0.212447592349} O8 45 1 14 {} {0.654299386319 0.476234846857 0.460872870441} Si8 46 1 7 {} {0.638805898837 0.557256525883 0.487991975146} N4 47 1 14 {} {0.64515605755 0.584866864602 0.598237789367} Si9 48 1 14 {} {0.614846052266 0.610916021404 0.408779234855} Si10 49 1 7 {} {0.625886466967 0.591868821551 0.299200422546} N5 50 1 7 {} {0.698167962908 0.604694795025 0.634530928788} N6 51 1 1 {} {0.573280632774 0.354528244261 0.26429640325} H22 52 1 1 {} {0.628027520528 0.327902283555 0.290652572871} H23 53 1 1 {} {0.61499851757 0.260122530221 0.47775768363} H24 54 1 1 {} {0.509533577149 0.398030639126 0.419286606118} H25 55 1 1 {} {0.527441444835 0.386506731339 0.531379719457} H26 56 1 1 {} {0.511873732164 0.316134021257 0.46621510209} H27 57 1 1 {} {0.50651896881 0.169960886306 0.264055678411} H28 58 1 1 {} {0.506603231834 0.247233314835 0.205338496255} H29 59 1 1 {} {0.495425397989 0.245975297174 0.321442151621} H30 60 1 1 {} {0.594709298564 0.146700818075 0.384348146865} H31 61 1 1 {} {0.593261959069 0.192674431356 0.153731119154} H32 62 1 1 {} {0.676311357085 0.44740552337 0.541556632167} H33 63 1 1 {} {0.686014523088 0.475787319072 0.384255755511} H34 64 1 1 {} {0.617762037359 0.64705748402 0.605028862936} H35 65 1 1 {} {0.628916268193 0.531935633445 0.660167555345} H36 66 1 1 {} {0.565148324065 0.610072891186 0.416622757686} H37 67 1 1 {} {0.631867724453 0.679748275634 0.427081189587} H38 68 1 1 {} {0.609601334329 0.553120020037 0.269279171577} H39 69 1 1 {} {0.657678601624 0.595199775395 0.274977638999} H40 70 1 1 {} {0.719387667324 0.567568259637 0.65245123175} H41 71 1 1 {} {0.714961641616 0.643697016473 0.607469709538} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end