iterations/neb0_image02_iter11.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351093985558 0.555076039772 0.421936667528} C1 1 1 14 {} {0.331991083699 0.522040832401 0.532975218208} Si1 2 1 14 {} {0.406310616263 0.597215195117 0.41771206508} Si2 3 1 8 {} {0.335344945467 0.582316065808 0.608225317731} O1 4 1 8 {} {0.27911155082 0.500040069428 0.524986624361} O2 5 1 6 {} {0.363702404013 0.446092901493 0.568358677136} C2 6 1 6 {} {0.455417840895 0.539618289693 0.41144084866} C3 7 1 8 {} {0.407949053501 0.641632171136 0.512785622962} O3 8 1 8 {} {0.40666513038 0.648138930414 0.329927429958} O4 9 1 14 {} {0.226774040704 0.505640022352 0.555621183936} Si3 10 1 7 {} {0.207177984157 0.426956875276 0.587048683206} N1 11 1 14 {} {0.171133156154 0.422695611036 0.678911651637} Si4 12 1 14 {} {0.222777727624 0.356956152222 0.522976968802} Si5 13 1 7 {} {0.223992573005 0.369277280111 0.409415677813} N2 14 1 7 {} {0.123601208219 0.470970842288 0.671784430293} N3 15 1 1 {} {0.350659308335 0.514660820812 0.371882264843} H1 16 1 1 {} {0.326169126605 0.592221116132 0.399888555435} H2 17 1 1 {} {0.359101186763 0.614486407788 0.595145298562} H3 18 1 1 {} {0.360374891867 0.405097128282 0.519858653414} H4 19 1 1 {} {0.351031199323 0.428033442201 0.632864731314} H5 20 1 1 {} {0.399419682727 0.457089769958 0.576634802804} H6 21 1 1 {} {0.487203998018 0.567262877819 0.410668913662} H7 22 1 1 {} {0.453994166258 0.509020239719 0.350465107026} H8 23 1 1 {} {0.45638655547 0.505438473582 0.468874679024} H9 24 1 1 {} {0.433183538624 0.670960307084 0.523081370036} H10 25 1 1 {} {0.435004931065 0.656884104215 0.301130624695} H11 26 1 1 {} {0.221044901803 0.551352032818 0.633587383079} H12 27 1 1 {} {0.201312834623 0.532270772664 0.477889691981} H13 28 1 1 {} {0.158268723641 0.350967354239 0.687059459475} H14 29 1 1 {} {0.194187977907 0.447015086476 0.760803675225} H15 30 1 1 {} {0.268690960497 0.335288651268 0.547983779182} H16 31 1 1 {} {0.189647463818 0.303578291985 0.543392353198} H17 32 1 1 {} {0.250414561544 0.393334393732 0.38154589675} H18 33 1 1 {} {0.195508048916 0.380024249086 0.375497697185} H19 34 1 1 {} {0.123445773856 0.51857676361 0.695487541992} H20 35 1 1 {} {0.100955570803 0.465022506128 0.62195838453} H21 36 1 6 {} {0.590859040184 0.32761291555 0.309981496022} C4 37 1 14 {} {0.586080326437 0.361065721366 0.4269651795} Si6 38 1 14 {} {0.574917622313 0.238561005916 0.292025561993} Si7 39 1 8 {} {0.614705922256 0.312048861623 0.495027093133} O5 40 1 8 {} {0.608736382837 0.436120826123 0.431971542413} O6 41 1 6 {} {0.526831806166 0.369872029316 0.463588585076} C5 42 1 6 {} {0.514023664263 0.227866344806 0.268428338742} C6 43 1 8 {} {0.590158938448 0.199857404475 0.386303579503} O7 44 1 8 {} {0.604649326098 0.201601353761 0.212161310823} O8 45 1 14 {} {0.652447148858 0.48098343095 0.460650096462} Si8 46 1 7 {} {0.636957209509 0.562052061566 0.487657042177} N4 47 1 14 {} {0.643434933825 0.589747169348 0.598056151851} Si9 48 1 14 {} {0.612975995413 0.615756808945 0.408788306292} Si10 49 1 7 {} {0.624152380346 0.596504136947 0.298876210944} N5 50 1 7 {} {0.696199112363 0.609548089735 0.634388944432} N6 51 1 1 {} {0.571438792289 0.359362780439 0.264018537538} H22 52 1 1 {} {0.626188723833 0.332724252067 0.290396432484} H23 53 1 1 {} {0.613164551639 0.264921010216 0.477474222312} H24 54 1 1 {} {0.507705262197 0.402840212269 0.419014558058} H25 55 1 1 {} {0.525599110841 0.391327398349 0.531117788129} H26 56 1 1 {} {0.510036323426 0.320966716211 0.465930348349} H27 57 1 1 {} {0.504695006849 0.17475545215 0.263802196037} H28 58 1 1 {} {0.504748585879 0.252035818126 0.205085102031} H29 59 1 1 {} {0.493599004015 0.250752512959 0.321179702346} H30 60 1 1 {} {0.592901724033 0.151518607162 0.384059071478} H31 61 1 1 {} {0.591420240111 0.197503814551 0.153450320475} H32 62 1 1 {} {0.674477621396 0.452234351021 0.541305924505} H33 63 1 1 {} {0.684150730531 0.48061571553 0.38398664069} H34 64 1 1 {} {0.615915476346 0.651838848064 0.604705185918} H35 65 1 1 {} {0.62706799995 0.536767560293 0.659769653545} H36 66 1 1 {} {0.563265165795 0.614946076513 0.416310018904} H37 67 1 1 {} {0.630033896316 0.684590494793 0.426710621615} H38 68 1 1 {} {0.607746893798 0.558004681345 0.268993571174} H39 69 1 1 {} {0.655766278671 0.600008738889 0.274734089265} H40 70 1 1 {} {0.717565716665 0.572358314676 0.652198172807} H41 71 1 1 {} {0.713166350369 0.648602743694 0.607166782505} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end