iterations/neb0_image02_iter12.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351093545139 0.555073065956 0.421939962285} C1 1 1 14 {} {0.331982387997 0.522030380476 0.532972138979} Si1 2 1 14 {} {0.406310388088 0.597214413958 0.417712461411} Si2 3 1 8 {} {0.335349735598 0.58231991957 0.608228937181} O1 4 1 8 {} {0.279130958595 0.500038594341 0.524979309867} O2 5 1 6 {} {0.363701615796 0.446092503086 0.568358757351} C2 6 1 6 {} {0.455418615268 0.539619363417 0.411441038379} C3 7 1 8 {} {0.407950088692 0.641636357328 0.512788789817} O3 8 1 8 {} {0.406668370272 0.648144219482 0.329924471311} O4 9 1 14 {} {0.226759857775 0.505641957026 0.555625265969} Si3 10 1 7 {} {0.207176942933 0.42695097128 0.587048077272} N1 11 1 14 {} {0.171134097986 0.422693687033 0.678908902036} Si4 12 1 14 {} {0.222775340967 0.356957583836 0.522978717626} Si5 13 1 7 {} {0.22399452437 0.369270695059 0.409409782619} N2 14 1 7 {} {0.123601697072 0.470971324685 0.67179355148} N3 15 1 1 {} {0.350659345835 0.514660978483 0.371884659851} H1 16 1 1 {} {0.326166575073 0.592221106544 0.399887127971} H2 17 1 1 {} {0.359097970844 0.614480624119 0.595144941693} H3 18 1 1 {} {0.360374318377 0.405095345485 0.519860570627} H4 19 1 1 {} {0.351031515964 0.428030838713 0.632867299252} H5 20 1 1 {} {0.39941776477 0.457089520527 0.576634349909} H6 21 1 1 {} {0.487202288198 0.567262959867 0.410670367868} H7 22 1 1 {} {0.453994309421 0.509022129823 0.350467771104} H8 23 1 1 {} {0.456386508741 0.505440131124 0.468873916549} H9 24 1 1 {} {0.433180285899 0.670961333358 0.523079664288} H10 25 1 1 {} {0.435000178962 0.656881345397 0.301133628122} H11 26 1 1 {} {0.221045520873 0.551351140578 0.633583423032} H12 27 1 1 {} {0.201313487917 0.53227173574 0.477888006} H13 28 1 1 {} {0.158270824746 0.350971740882 0.687063021237} H14 29 1 1 {} {0.194189993345 0.447020270896 0.760805107028} H15 30 1 1 {} {0.26869171838 0.33528841174 0.547979870256} H16 31 1 1 {} {0.189647453309 0.30357847788 0.54339146593} H17 32 1 1 {} {0.250414810804 0.393335084865 0.381541636529} H18 33 1 1 {} {0.195503960072 0.380027289541 0.375492802434} H19 34 1 1 {} {0.123446354093 0.518579683467 0.69548580048} H20 35 1 1 {} {0.100954254063 0.465022463029 0.621956394701} H21 36 1 6 {} {0.590860789171 0.327618072432 0.30997863194} C4 37 1 14 {} {0.58607705344 0.361054725415 0.426973138686} Si6 38 1 14 {} {0.574917792957 0.238554341483 0.292025827967} Si7 39 1 8 {} {0.614704987828 0.312053781507 0.495028523981} O5 40 1 8 {} {0.608744362329 0.436130887349 0.431974321788} O6 41 1 6 {} {0.526832472484 0.369874486646 0.463586068897} C5 42 1 6 {} {0.514025363957 0.227865797659 0.268429959464} C6 43 1 8 {} {0.590156932281 0.199858873699 0.386298480056} O7 44 1 8 {} {0.604653205395 0.201612423796 0.212165708047} O8 45 1 14 {} {0.652445028723 0.480969028125 0.460657595817} Si8 46 1 7 {} {0.636954004688 0.562053797808 0.487644086868} N4 47 1 14 {} {0.643454780731 0.58975787374 0.598085887775} Si9 48 1 14 {} {0.612976894164 0.615759157832 0.40881607915} Si10 49 1 7 {} {0.624188902574 0.596453813018 0.298813049935} N5 50 1 7 {} {0.696140189501 0.609542297719 0.634407750388} N6 51 1 1 {} {0.571439282805 0.359364765594 0.264019017649} H22 52 1 1 {} {0.626188385259 0.332725057143 0.290397656729} H23 53 1 1 {} {0.613165450366 0.264913232328 0.47747082684} H24 54 1 1 {} {0.507706217639 0.402841415373 0.419014486608} H25 55 1 1 {} {0.525598614874 0.391327740978 0.531117818409} H26 56 1 1 {} {0.510035666984 0.320968150572 0.465927412288} H27 57 1 1 {} {0.504698443166 0.174752740947 0.263804668183} H28 58 1 1 {} {0.504746138928 0.252033811396 0.205085912632} H29 59 1 1 {} {0.493600595898 0.250747939341 0.321182713289} H30 60 1 1 {} {0.592906412765 0.151522189593 0.384054464272} H31 61 1 1 {} {0.591419566593 0.197505489162 0.153443583734} H32 62 1 1 {} {0.674477521132 0.452237340361 0.541302473615} H33 63 1 1 {} {0.684148769875 0.48061694587 0.383982815078} H34 64 1 1 {} {0.615915997129 0.651832299601 0.604694639733} H35 65 1 1 {} {0.62706836168 0.536769241909 0.659750667067} H36 66 1 1 {} {0.563257771129 0.614953193049 0.416308865505} H37 67 1 1 {} {0.630034148339 0.68458880605 0.426698075844} H38 68 1 1 {} {0.607753396732 0.558041426909 0.269015294964} H39 69 1 1 {} {0.6557233883 0.600005136298 0.274770033377} H40 70 1 1 {} {0.717588371365 0.572325775689 0.652215075046} H41 71 1 1 {} {0.713189099831 0.648646623896 0.607142708826} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end