iterations/neb0_image02_iter17.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351092792722 0.555075892216 0.421933268626} C1 1 1 14 {} {0.332026139212 0.522046595508 0.532974386981} Si1 2 1 14 {} {0.406324546241 0.597216549738 0.417713804074} Si2 3 1 8 {} {0.335331002274 0.582298659664 0.608232171438} O1 4 1 8 {} {0.279114808619 0.500035413871 0.524986734527} O2 5 1 6 {} {0.363696705375 0.44609201289 0.568358987835} C2 6 1 6 {} {0.455417794433 0.539618074864 0.411439654176} C3 7 1 8 {} {0.4079383161 0.641632095732 0.512792533445} O3 8 1 8 {} {0.406652843486 0.648134567586 0.329950472155} O4 9 1 14 {} {0.226785893936 0.505666345024 0.555604894554} Si3 10 1 7 {} {0.207167215375 0.426952885376 0.587041767635} N1 11 1 14 {} {0.171137642957 0.422668792823 0.678917870866} Si4 12 1 14 {} {0.222774710208 0.356954670471 0.523020518789} Si5 13 1 7 {} {0.223984413131 0.369272152783 0.409405767544} N2 14 1 7 {} {0.123604401221 0.470965306683 0.671777931256} N3 15 1 1 {} {0.350659335184 0.514654035645 0.371880631415} H1 16 1 1 {} {0.326161306217 0.592226341807 0.399886527354} H2 17 1 1 {} {0.35910429103 0.614482806655 0.595132529339} H3 18 1 1 {} {0.360375142513 0.40509388156 0.519863669881} H4 19 1 1 {} {0.351033318494 0.428029099431 0.632867608392} H5 20 1 1 {} {0.399408267866 0.457090886986 0.576631057732} H6 21 1 1 {} {0.487196439137 0.567262220104 0.410671031417} H7 22 1 1 {} {0.453994750099 0.509025561013 0.350472215813} H8 23 1 1 {} {0.456384923954 0.505447169579 0.46886772624} H9 24 1 1 {} {0.433185888369 0.670969711588 0.523078187254} H10 25 1 1 {} {0.435010106893 0.656882597244 0.301122973954} H11 26 1 1 {} {0.221040882008 0.551349948936 0.633590415921} H12 27 1 1 {} {0.201305988834 0.532269277535 0.477884097482} H13 28 1 1 {} {0.158268814302 0.350973458275 0.687069009283} H14 29 1 1 {} {0.194191426129 0.447025870559 0.760797874023} H15 30 1 1 {} {0.268694584696 0.335289064654 0.547976827132} H16 31 1 1 {} {0.189642462601 0.303570445297 0.543385983353} H17 32 1 1 {} {0.250420135649 0.393340532617 0.381526250738} H18 33 1 1 {} {0.195503751858 0.380029184574 0.375483814788} H19 34 1 1 {} {0.123442995956 0.518587050621 0.695483261755} H20 35 1 1 {} {0.100956869717 0.465028387416 0.621968561108} H21 36 1 6 {} {0.590858999304 0.327607131158 0.309979794544} C4 37 1 14 {} {0.586076891785 0.361094086844 0.42697725084} Si6 38 1 14 {} {0.574912585085 0.238535121333 0.292035140626} Si7 39 1 8 {} {0.614703431898 0.312024682543 0.49501924235} O5 40 1 8 {} {0.60873846127 0.436123049876 0.431984178963} O6 41 1 6 {} {0.526828327173 0.369868918384 0.463589187379} C5 42 1 6 {} {0.514022027705 0.22786288279 0.268428843556} C6 43 1 8 {} {0.590160266464 0.199858567594 0.386306403006} O7 44 1 8 {} {0.604655154008 0.201611619042 0.212130517518} O8 45 1 14 {} {0.652452727181 0.480988611558 0.460661594333} Si8 46 1 7 {} {0.636967561286 0.562076157436 0.487719500167} N4 47 1 14 {} {0.643296190471 0.589696243181 0.598024491323} Si9 48 1 14 {} {0.613041262425 0.615729169354 0.408457931216} Si10 49 1 7 {} {0.624100046591 0.59649634695 0.299005279952} N5 50 1 7 {} {0.696281477704 0.609587321897 0.634414630679} N6 51 1 1 {} {0.57144102583 0.359370888167 0.264023616248} H22 52 1 1 {} {0.626189945481 0.332730100842 0.290396731544} H23 53 1 1 {} {0.61316721767 0.264922770476 0.477480186593} H24 54 1 1 {} {0.507711272261 0.402842991527 0.419016118852} H25 55 1 1 {} {0.525599785951 0.391326709855 0.531109507677} H26 56 1 1 {} {0.510032447585 0.320964840119 0.465929134355} H27 57 1 1 {} {0.504703707765 0.174750300194 0.263804289042} H28 58 1 1 {} {0.504744469345 0.252033762131 0.205082045179} H29 59 1 1 {} {0.493600733909 0.250749297717 0.32119055369} H30 60 1 1 {} {0.59290771269 0.151531891599 0.384045285936} H31 61 1 1 {} {0.591424867567 0.197508214506 0.153462667466} H32 62 1 1 {} {0.67447602943 0.452236617699 0.54129478408} H33 63 1 1 {} {0.68415423404 0.480611714551 0.383977341481} H34 64 1 1 {} {0.615929265086 0.651837920057 0.604697201031} H35 65 1 1 {} {0.627077416994 0.5367624826 0.659787744456} H36 66 1 1 {} {0.563261773574 0.614950990938 0.416339281853} H37 67 1 1 {} {0.630025688601 0.684569646221 0.426733889255} H38 68 1 1 {} {0.607749722345 0.55803195543 0.269026154689} H39 69 1 1 {} {0.655765008743 0.60000776101 0.274767343798} H40 70 1 1 {} {0.717571780804 0.572358106514 0.652211877663} H41 71 1 1 {} {0.713171546366 0.648609908768 0.607185546748} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end