iterations/neb0_image02_iter19.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351087338587 0.555075157055 0.421947823393} C1 1 1 14 {} {0.332028218633 0.522037498325 0.532989676173} Si1 2 1 14 {} {0.406319391188 0.597224015131 0.417721624152} Si2 3 1 8 {} {0.335332650773 0.582262025944 0.608244419912} O1 4 1 8 {} {0.279092571921 0.500006794494 0.524979375387} O2 5 1 6 {} {0.363690587044 0.44607842784 0.568368777717} C2 6 1 6 {} {0.455416971551 0.539625714872 0.41144399805} C3 7 1 8 {} {0.407929251525 0.6416358149 0.512791931198} O3 8 1 8 {} {0.406639094891 0.648152184113 0.329978643847} O4 9 1 14 {} {0.226784691836 0.505655675468 0.555587289825} Si3 10 1 7 {} {0.207160201196 0.426940721873 0.587031808003} N1 11 1 14 {} {0.171142246207 0.422675867728 0.678930761803} Si4 12 1 14 {} {0.222773654997 0.356946647894 0.522996402184} Si5 13 1 7 {} {0.223976428974 0.369239496904 0.409358958205} N2 14 1 7 {} {0.12359684393 0.47096239414 0.671802392886} N3 15 1 1 {} {0.350659839098 0.514650333501 0.371890507032} H1 16 1 1 {} {0.326151886291 0.592213955956 0.399884951827} H2 17 1 1 {} {0.359109740024 0.614478601815 0.595114797194} H3 18 1 1 {} {0.360371636973 0.405080684364 0.519876558725} H4 19 1 1 {} {0.351036408072 0.428013002236 0.632879456151} H5 20 1 1 {} {0.399398577219 0.457090294419 0.576627933509} H6 21 1 1 {} {0.487191706432 0.567268236828 0.410680029429} H7 22 1 1 {} {0.453995905058 0.509034451254 0.350481705433} H8 23 1 1 {} {0.456384513537 0.505455230703 0.468868375472} H9 24 1 1 {} {0.4331790266 0.670994067884 0.523072116487} H10 25 1 1 {} {0.435012584924 0.656874072363 0.301107704142} H11 26 1 1 {} {0.221042976582 0.551348976786 0.633574026163} H12 27 1 1 {} {0.201306791836 0.532277493497 0.477861964769} H13 28 1 1 {} {0.158281011486 0.350990699165 0.687093774917} H14 29 1 1 {} {0.194203529063 0.447057041249 0.760793666665} H15 30 1 1 {} {0.268694496574 0.335290266808 0.547950183793} H16 31 1 1 {} {0.189640330938 0.303570674914 0.543380652276} H17 32 1 1 {} {0.250418556395 0.393341350608 0.381501674453} H18 33 1 1 {} {0.195497131899 0.380041799527 0.375473526638} H19 34 1 1 {} {0.123448290857 0.518605839304 0.695473136034} H20 35 1 1 {} {0.100960690449 0.465030691017 0.621985170987} H21 36 1 6 {} {0.590859608432 0.327616884072 0.309984107213} C4 37 1 14 {} {0.586075621269 0.361089425124 0.426990098907} Si6 38 1 14 {} {0.574913752516 0.238546768666 0.292023299483} Si7 39 1 8 {} {0.614700904837 0.311989406409 0.495030646416} O5 40 1 8 {} {0.608741277897 0.436094390034 0.431991620683} O6 41 1 6 {} {0.526828659452 0.369878201147 0.463590566535} C5 42 1 6 {} {0.514029407359 0.227851040828 0.268428846982} C6 43 1 8 {} {0.590150020062 0.199860876939 0.386296719744} O7 44 1 8 {} {0.604673963477 0.201671591966 0.212091240164} O8 45 1 14 {} {0.652457212991 0.480980674507 0.460683831981} Si8 46 1 7 {} {0.636973301734 0.562073925643 0.487735773085} N4 47 1 14 {} {0.643263731154 0.589691763309 0.598014701476} Si9 48 1 14 {} {0.613054212993 0.615701087403 0.408408329676} Si10 49 1 7 {} {0.624077429252 0.596407421987 0.299260096725} N5 50 1 7 {} {0.696370879236 0.609663165753 0.634536216749} N6 51 1 1 {} {0.571442918353 0.359388817324 0.264022117865} H22 52 1 1 {} {0.626194554959 0.33273836334 0.29040134567} H23 53 1 1 {} {0.613174822657 0.264920827003 0.477474867879} H24 54 1 1 {} {0.507716479205 0.402856322339 0.419008124897} H25 55 1 1 {} {0.525596165309 0.391328034844 0.531105210651} H26 56 1 1 {} {0.510028471644 0.32097766901 0.465908491676} H27 57 1 1 {} {0.50472627175 0.174733316264 0.263820823849} H28 58 1 1 {} {0.504729933373 0.252017339214 0.20509548231} H29 59 1 1 {} {0.493611340194 0.250718706878 0.321214104279} H30 60 1 1 {} {0.59294115924 0.15154729091 0.384015953115} H31 61 1 1 {} {0.591432816346 0.197523390143 0.153471164969} H32 62 1 1 {} {0.674481861376 0.452247175304 0.54129725092} H33 63 1 1 {} {0.684140436912 0.480615154974 0.383966894917} H34 64 1 1 {} {0.615930702783 0.651807253125 0.604639418903} H35 65 1 1 {} {0.627078074053 0.536761470351 0.659690930356} H36 66 1 1 {} {0.56323216728 0.614999745986 0.416322990006} H37 67 1 1 {} {0.630030480785 0.684569664933 0.426655896155} H38 68 1 1 {} {0.607711811496 0.558049317788 0.268975423687} H39 69 1 1 {} {0.655793753039 0.599999745654 0.274736489639} H40 70 1 1 {} {0.717550569313 0.57239811402 0.652203452528} H41 71 1 1 {} {0.713161424729 0.648585783038 0.607247977187} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end