iterations/neb0_image02_iter20.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351086518546 0.555073606298 0.421952510112} C1 1 1 14 {} {0.332017491694 0.522026261809 0.532990513287} Si1 2 1 14 {} {0.406315681643 0.597224431995 0.417724617225} Si2 3 1 8 {} {0.335339145785 0.582260147215 0.608249359014} O1 4 1 8 {} {0.279103193199 0.500000421284 0.524972225397} O2 5 1 6 {} {0.363689179221 0.446074500774 0.568371147149} C2 6 1 6 {} {0.455417193292 0.539628544553 0.411445236226} C3 7 1 8 {} {0.407929723123 0.641640933418 0.512794165588} O3 8 1 8 {} {0.406641348215 0.648161475798 0.329978751182} O4 9 1 14 {} {0.226772844014 0.505649870024 0.555588173764} Si3 10 1 7 {} {0.207158677522 0.426935705515 0.587028884632} N1 11 1 14 {} {0.171143532938 0.422680521117 0.678929755754} Si4 12 1 14 {} {0.222771471509 0.356947666807 0.522986703477} Si5 13 1 7 {} {0.22397792141 0.369227908704 0.409345471075} N2 14 1 7 {} {0.12359593891 0.470963403886 0.671816893073} N3 15 1 1 {} {0.350659918319 0.514650038142 0.371894914028} H1 16 1 1 {} {0.326148556446 0.592210326988 0.399884212362} H2 17 1 1 {} {0.359106935811 0.614471665558 0.595112105141} H3 18 1 1 {} {0.360370295679 0.405076465757 0.51988057745} H4 19 1 1 {} {0.351037108245 0.428007761293 0.632883866148} H5 20 1 1 {} {0.399395970078 0.457089921241 0.576627237152} H6 21 1 1 {} {0.487190249179 0.567270214575 0.410683093073} H7 22 1 1 {} {0.453996159623 0.509037303099 0.35048473915} H8 23 1 1 {} {0.456384396544 0.505457600613 0.468868916981} H9 24 1 1 {} {0.433173864118 0.670998966084 0.523069385288} H10 25 1 1 {} {0.435007215454 0.656869637555 0.301108806809} H11 26 1 1 {} {0.221044126721 0.551348537331 0.633567165752} H12 27 1 1 {} {0.201307830636 0.532280399213 0.477855626834} H13 28 1 1 {} {0.158285222394 0.350996177774 0.687102037244} H14 29 1 1 {} {0.194207434341 0.447067317603 0.760793939104} H15 30 1 1 {} {0.26869489257 0.335290111376 0.547941256745} H16 31 1 1 {} {0.189640036424 0.303570915602 0.543379377777} H17 32 1 1 {} {0.25041652746 0.393340632145 0.381495485974} H18 33 1 1 {} {0.195493012864 0.380046739719 0.375468577302} H19 34 1 1 {} {0.123450223921 0.518610047693 0.695468860761} H20 35 1 1 {} {0.100960464178 0.465030775818 0.621986765928} H21 36 1 6 {} {0.590860917492 0.327623343569 0.309983847112} C4 37 1 14 {} {0.586073344368 0.361075765837 0.42699779948} Si6 38 1 14 {} {0.574914883796 0.238547219368 0.292018757965} Si7 39 1 8 {} {0.614699421261 0.311989927726 0.495034869741} O5 40 1 8 {} {0.608747879321 0.436096441035 0.431994797063} O6 41 1 6 {} {0.526829497451 0.369882177864 0.46358881696} C5 42 1 6 {} {0.514032254424 0.22784810138 0.268429975486} C6 43 1 8 {} {0.590146252462 0.199863244512 0.386291086946} O7 44 1 8 {} {0.604681440341 0.201693462912 0.212091198592} O8 45 1 14 {} {0.652456801845 0.480967943073 0.460695002455} Si8 46 1 7 {} {0.63696910351 0.562072377815 0.487710322029} N4 47 1 14 {} {0.643295382466 0.589709710773 0.598045633694} Si9 48 1 14 {} {0.613046465252 0.61570239989 0.408475209832} Si10 49 1 7 {} {0.624112099695 0.596348464372 0.299239998031} N5 50 1 7 {} {0.696329012506 0.609667868293 0.634574372827} N6 51 1 1 {} {0.571443686169 0.359393688775 0.264022040494} H22 52 1 1 {} {0.626195242545 0.33274041208 0.290403329967} H23 53 1 1 {} {0.613177007191 0.264911883568 0.477469772144} H24 54 1 1 {} {0.507718033148 0.402860235866 0.419006051778} H25 55 1 1 {} {0.525594836046 0.391328717181 0.531105197303} H26 56 1 1 {} {0.510027302478 0.320981746765 0.465901642948} H27 57 1 1 {} {0.504733488727 0.174727401689 0.263826247987} H28 58 1 1 {} {0.50472506512 0.252011984964 0.205099571296} H29 59 1 1 {} {0.493614927204 0.25070828616 0.321221122406} H30 60 1 1 {} {0.592952186229 0.151551314159 0.384006521714} H31 61 1 1 {} {0.59143317102 0.197527521303 0.1534639881} H32 62 1 1 {} {0.67448343131 0.452251137019 0.541296380604} H33 63 1 1 {} {0.6841354764 0.480617213626 0.383962267278} H34 64 1 1 {} {0.61592872563 0.651797821186 0.604618815607} H35 65 1 1 {} {0.627076474481 0.536759378356 0.659656526313} H36 66 1 1 {} {0.563223801066 0.615015645171 0.416315075223} H37 67 1 1 {} {0.630032586512 0.684568631807 0.42662502882} H38 68 1 1 {} {0.607704711423 0.558074741097 0.268973893262} H39 69 1 1 {} {0.655765951532 0.59999557952 0.274756020355} H40 70 1 1 {} {0.717563307973 0.572382628849 0.652212827266} H41 71 1 1 {} {0.713177500725 0.648614955561 0.607240936946} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end