iterations/neb0_image02_iter23.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351088991213 0.555073493197 0.421949568095} C1 1 1 14 {} {0.331990847992 0.521998976944 0.532982866231} Si1 2 1 14 {} {0.406305140368 0.597219746914 0.417733705364} Si2 3 1 8 {} {0.33536048901 0.582279462754 0.608259125862} O1 4 1 8 {} {0.279137002857 0.499998609671 0.524960348377} O2 5 1 6 {} {0.363686623796 0.446065815784 0.568373721411} C2 6 1 6 {} {0.455414439159 0.539634626573 0.411447663602} C3 7 1 8 {} {0.407937220522 0.641658924475 0.512805861962} O3 8 1 8 {} {0.406662719337 0.648182616699 0.329959905756} O4 9 1 14 {} {0.22675275202 0.505631390638 0.55559244842} Si3 10 1 7 {} {0.207155428691 0.426939238357 0.58701825387} N1 11 1 14 {} {0.171144800879 0.422697520526 0.678920157125} Si4 12 1 14 {} {0.222764480706 0.356958663306 0.522966421959} Si5 13 1 7 {} {0.223990399301 0.369215221056 0.409330331963} N2 14 1 7 {} {0.123600774749 0.470972651916 0.671850690936} N3 15 1 1 {} {0.350659786706 0.514648911225 0.371903963029} H1 16 1 1 {} {0.326143304543 0.592203913232 0.399886467524} H2 17 1 1 {} {0.359089773942 0.614442348355 0.595113089737} H3 18 1 1 {} {0.360367771321 0.405068211158 0.519886460993} H4 19 1 1 {} {0.351037665009 0.427999591769 0.632891801095} H5 20 1 1 {} {0.399392862536 0.457089685018 0.576626597137} H6 21 1 1 {} {0.487190390683 0.567277278864 0.410688388508} H7 22 1 1 {} {0.453996144634 0.509040382176 0.350485214488} H8 23 1 1 {} {0.456383266358 0.50546170543 0.468871943625} H9 24 1 1 {} {0.433158337351 0.67100040767 0.523062071103} H10 25 1 1 {} {0.434980992029 0.656857469425 0.301127158894} H11 26 1 1 {} {0.221044601598 0.551348507951 0.633557165182} H12 27 1 1 {} {0.201307771515 0.532284627895 0.477844614531} H13 28 1 1 {} {0.158290236477 0.350996193047 0.687120361726} H14 29 1 1 {} {0.194212963078 0.447084209127 0.76079132922} H15 30 1 1 {} {0.268696870174 0.33528848255 0.547924259324} H16 31 1 1 {} {0.189637982702 0.303566177532 0.543377024492} H17 32 1 1 {} {0.250402831117 0.393332121143 0.381492963411} H18 33 1 1 {} {0.195486158829 0.380055938908 0.375457809591} H19 34 1 1 {} {0.123453206081 0.518605366285 0.695454406051} H20 35 1 1 {} {0.100959356208 0.465031527547 0.621988768421} H21 36 1 6 {} {0.590861963121 0.327632514351 0.309985082629} C4 37 1 14 {} {0.586071545478 0.361044538965 0.427010486532} Si6 38 1 14 {} {0.574919183093 0.23854776113 0.292006816455} Si7 39 1 8 {} {0.614693747287 0.312019215 0.495040987501} O5 40 1 8 {} {0.608761710554 0.436112863312 0.432007079811} O6 41 1 6 {} {0.526829053365 0.369884869255 0.463581160292} C5 42 1 6 {} {0.51403383747 0.227842640263 0.268433048575} C6 43 1 8 {} {0.590142138003 0.199875188807 0.386285394439} O7 44 1 8 {} {0.604698554796 0.201731575389 0.212116203725} O8 45 1 14 {} {0.652457018981 0.480949970335 0.460709068405} Si8 46 1 7 {} {0.636950224464 0.56207010294 0.487605309376} N4 47 1 14 {} {0.643436096488 0.589781379346 0.59814395105} Si9 48 1 14 {} {0.61299513518 0.615730877612 0.408754256622} Si10 49 1 7 {} {0.624242387392 0.596236477047 0.299014266684} N5 50 1 7 {} {0.696145567902 0.609629991804 0.634618995033} N6 51 1 1 {} {0.571446679139 0.359400314017 0.264026845225} H22 52 1 1 {} {0.62619499793 0.332744247684 0.290407370392} H23 53 1 1 {} {0.613179978911 0.264872570789 0.477454197663} H24 54 1 1 {} {0.507722509762 0.402867059009 0.419004047438} H25 55 1 1 {} {0.525592326804 0.391331179445 0.531109129404} H26 56 1 1 {} {0.510024478086 0.320987263194 0.465892062501} H27 57 1 1 {} {0.504746096068 0.174715761941 0.263833635953} H28 58 1 1 {} {0.504717002195 0.252002802088 0.20510492775} H29 59 1 1 {} {0.493621301722 0.250691148855 0.321233362389} H30 60 1 1 {} {0.592971014313 0.151549541085 0.383988481785} H31 61 1 1 {} {0.591428870156 0.197531971278 0.153427619472} H32 62 1 1 {} {0.674487612687 0.452253019231 0.541300108375} H33 63 1 1 {} {0.684128504916 0.480619506804 0.383955581015} H34 64 1 1 {} {0.615915160046 0.651804001498 0.604587549489} H35 65 1 1 {} {0.627065912176 0.536729554124 0.659634636061} H36 66 1 1 {} {0.563237388594 0.615037907297 0.41630205822} H37 67 1 1 {} {0.630035796124 0.684554962586 0.426572281755} H38 68 1 1 {} {0.60767979365 0.558105703655 0.268966843928} H39 69 1 1 {} {0.65567632582 0.599988142787 0.274833271151} H40 70 1 1 {} {0.717607814025 0.572333429394 0.652238415218} H41 71 1 1 {} {0.713229859547 0.648706261427 0.607198834963} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end