iterations/neb0_image02_iter25.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.35109323326 0.55508073 0.421931986027} C1 1 1 14 {} {0.332000750606 0.522004887089 0.532977870852} Si1 2 1 14 {} {0.406302976504 0.597217574154 0.417738825196} Si2 3 1 8 {} {0.33536138371 0.582289574182 0.60825912945} O1 4 1 8 {} {0.279128400362 0.500007452962 0.524970149261} O2 5 1 6 {} {0.363685397981 0.446061172272 0.568373488116} C2 6 1 6 {} {0.455409270553 0.539636242245 0.411447939648} C3 7 1 8 {} {0.40793896904 0.641663676987 0.512812064072} O3 8 1 8 {} {0.406672071042 0.648181455003 0.329954980256} O4 9 1 14 {} {0.226776061738 0.505625560369 0.555582518398} Si3 10 1 7 {} {0.207152311213 0.426961144299 0.587007827993} N1 11 1 14 {} {0.171143928179 0.422706805162 0.678919146325} Si4 12 1 14 {} {0.222763159084 0.356965352316 0.522963779777} Si5 13 1 7 {} {0.223994349371 0.369227753616 0.40934212134} N2 14 1 7 {} {0.12360764687 0.470978218253 0.671848653151} N3 15 1 1 {} {0.350659513431 0.514645662153 0.371903500896} H1 16 1 1 {} {0.326144293405 0.592202901312 0.399892767797} H2 17 1 1 {} {0.359081787703 0.614429178375 0.595114093053} H3 18 1 1 {} {0.360367750406 0.405066131377 0.519885222527} H4 19 1 1 {} {0.351037183203 0.428000871821 0.632891525293} H5 20 1 1 {} {0.39939326763 0.45709068933 0.576626587303} H6 21 1 1 {} {0.487193484458 0.567282939351 0.410688267116} H7 22 1 1 {} {0.453995591173 0.509038042402 0.350478127054} H8 23 1 1 {} {0.45638156327 0.505462532642 0.468874828312} H9 24 1 1 {} {0.433154751027 0.6709974097 0.523059668457} H10 25 1 1 {} {0.434970621895 0.656854809301 0.301136443587} H11 26 1 1 {} {0.221040909948 0.551349517061 0.633562926023} H12 27 1 1 {} {0.201302841765 0.532282604296 0.477842823657} H13 28 1 1 {} {0.158286018429 0.350981458888 0.687127317606} H14 29 1 1 {} {0.194211457466 0.447083382298 0.760782243274} H15 30 1 1 {} {0.26869796505 0.335287810639 0.547921878654} H16 31 1 1 {} {0.189634435411 0.303557451483 0.543375227886} H17 32 1 1 {} {0.250391439014 0.393324230359 0.38149937731} H18 33 1 1 {} {0.195491244426 0.380055373408 0.375457740564} H19 34 1 1 {} {0.123452191359 0.51859293387 0.695446009691} H20 35 1 1 {} {0.100961573356 0.465034221965 0.621996808039} H21 36 1 6 {} {0.590858087525 0.327622537041 0.309991859202} C4 37 1 14 {} {0.586078422419 0.361056104647 0.427002331753} Si6 38 1 14 {} {0.57492114655 0.238555268966 0.292001487616} Si7 39 1 8 {} {0.614690018612 0.312032620221 0.495036471328} O5 40 1 8 {} {0.608754714543 0.43611190197 0.432018144844} O6 41 1 6 {} {0.526825164621 0.36987720234 0.463579441143} C5 42 1 6 {} {0.514028024536 0.227839947497 0.268431943942} C6 43 1 8 {} {0.590147304763 0.199880994184 0.386297642974} O7 44 1 8 {} {0.604702258642 0.201727336199 0.212124400337} O8 45 1 14 {} {0.652462245683 0.480979242539 0.460694674498} Si8 46 1 7 {} {0.636945795666 0.562074311413 0.487573904497} N4 47 1 14 {} {0.643474397088 0.589799481904 0.598142279093} Si9 48 1 14 {} {0.612965361739 0.615749480303 0.408828110673} Si10 49 1 7 {} {0.62425342664 0.596276801942 0.298929742113} N5 50 1 7 {} {0.696125354204 0.609603041736 0.634584502481} N6 51 1 1 {} {0.571449215253 0.359399824672 0.264034236464} H22 52 1 1 {} {0.626194051704 0.332746157173 0.290407668562} H23 53 1 1 {} {0.613179465874 0.264856915907 0.477452103894} H24 54 1 1 {} {0.507725773056 0.402868585313 0.419004806573} H25 55 1 1 {} {0.525592271909 0.391332219486 0.531111297525} H26 56 1 1 {} {0.510022375692 0.32098399748 0.465895680805} H27 57 1 1 {} {0.504746996371 0.174713127993 0.263830457897} H28 58 1 1 {} {0.504717594567 0.252002299901 0.205103198057} H29 59 1 1 {} {0.493621451521 0.250692915927 0.321235859316} H30 60 1 1 {} {0.592970936453 0.151540549807 0.383984629743} H31 61 1 1 {} {0.591426759965 0.197529780388 0.15341379332} H32 62 1 1 {} {0.674490620738 0.452244046411 0.541310604189} H33 63 1 1 {} {0.684132477433 0.480615153618 0.383959325875} H34 64 1 1 {} {0.615904867939 0.651839790002 0.604599310353} H35 65 1 1 {} {0.627058348998 0.536691950565 0.659703448129} H36 66 1 1 {} {0.563279717998 0.615029306347 0.416310353031} H37 67 1 1 {} {0.630033780765 0.68453706157 0.426587011476} H38 68 1 1 {} {0.607650628948 0.558048249273 0.268933221789} H39 69 1 1 {} {0.655694866271 0.599991341035 0.274836357426} H40 70 1 1 {} {0.717601720211 0.572359300271 0.652228588092} H41 71 1 1 {} {0.713226529881 0.648689732058 0.607213542342} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end