iterations/neb0_image02_iter26.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.35109241839 0.555081215599 0.421930880333} C1 1 1 14 {} {0.332010159079 0.522012832088 0.532979257464} Si1 2 1 14 {} {0.406305907048 0.597220045922 0.417736826043} Si2 3 1 8 {} {0.335355074752 0.582282481927 0.608257794187} O1 4 1 8 {} {0.279116704788 0.500007739366 0.524974604171} O2 5 1 6 {} {0.363685242499 0.446061751743 0.568373342363} C2 6 1 6 {} {0.455408525395 0.539635836915 0.411447807244} C3 7 1 8 {} {0.407935797532 0.641659360546 0.512810101715} O3 8 1 8 {} {0.406665725093 0.648176103094 0.329963557188} O4 9 1 14 {} {0.226785486037 0.505630815926 0.555577664914} Si3 10 1 7 {} {0.20715189466 0.426963305155 0.587007218137} N1 11 1 14 {} {0.171143806889 0.422704297718 0.678923023498} Si4 12 1 14 {} {0.222764684816 0.356962301829 0.522966561653} Si5 13 1 7 {} {0.223990114964 0.369231339582 0.409345845976} N2 14 1 7 {} {0.123606976224 0.470976060483 0.67184001976} N3 15 1 1 {} {0.35065960137 0.514645240708 0.371901939459} H1 16 1 1 {} {0.32614511664 0.592203577659 0.399893432426} H2 17 1 1 {} {0.359085853624 0.614435017069 0.595112345791} H3 18 1 1 {} {0.360368106076 0.405066501603 0.519884108841} H4 19 1 1 {} {0.351037046133 0.428002001558 0.632890664137} H5 20 1 1 {} {0.39939366066 0.457090902771 0.576626568303} H6 21 1 1 {} {0.487193715634 0.567282966722 0.410687544013} H7 22 1 1 {} {0.45399553176 0.509037454818 0.350477094676} H8 23 1 1 {} {0.456381450211 0.505462169719 0.468874912498} H9 24 1 1 {} {0.433158088375 0.6709990577 0.523060769443} H10 25 1 1 {} {0.434976942868 0.656857197388 0.301130966646} H11 26 1 1 {} {0.221040158511 0.5513491345 0.633564823354} H12 27 1 1 {} {0.201302120938 0.532281221861 0.47784447697} H13 28 1 1 {} {0.158284784513 0.350980034799 0.687125975067} H14 29 1 1 {} {0.194210665036 0.447081216657 0.760780230529} H15 30 1 1 {} {0.26869727194 0.335288534369 0.547923622983} H16 31 1 1 {} {0.189634254847 0.303557315392 0.543374783919} H17 32 1 1 {} {0.250393029402 0.393325287952 0.381498921938} H18 33 1 1 {} {0.195494008059 0.38005363067 0.375460187772} H19 34 1 1 {} {0.123451700861 0.518594038297 0.695447892571} H20 35 1 1 {} {0.100962711368 0.465034682372 0.621999579026} H21 36 1 6 {} {0.590857201891 0.327618842469 0.309992570672} C4 37 1 14 {} {0.586080489732 0.361067798184 0.42699758501} Si6 38 1 14 {} {0.574920765542 0.238558604473 0.292003462391} Si7 39 1 8 {} {0.614690646624 0.312023014322 0.495034785967} O5 40 1 8 {} {0.60875015152 0.43610491988 0.432019080141} O6 41 1 6 {} {0.526824522895 0.369875487165 0.463580915219} C5 42 1 6 {} {0.514027082259 0.227839666776 0.268431169364} C6 43 1 8 {} {0.590148857409 0.199878151647 0.386300546146} O7 44 1 8 {} {0.604699592992 0.201720521825 0.212114136643} O8 45 1 14 {} {0.652462288495 0.480990459979 0.460684837282} Si8 46 1 7 {} {0.636952807402 0.562075582389 0.487611566732} N4 47 1 14 {} {0.643438200706 0.589779377519 0.598106509199} Si9 48 1 14 {} {0.612975132854 0.615743224385 0.408754598042} Si10 49 1 7 {} {0.624215036408 0.596305544514 0.298990957631} N5 50 1 7 {} {0.696177066794 0.609614952054 0.634573905845} N6 51 1 1 {} {0.571449300472 0.359399106102 0.264035070759} H22 52 1 1 {} {0.626193809467 0.332746084646 0.290407429719} H23 53 1 1 {} {0.613179136376 0.264865202723 0.477455791535} H24 54 1 1 {} {0.50772580992 0.402868115925 0.419004926005} H25 55 1 1 {} {0.525592624452 0.391331908646 0.531110683302} H26 56 1 1 {} {0.5100222079 0.320982611143 0.465897474357} H27 57 1 1 {} {0.504745550498 0.174714013191 0.263828980225} H28 58 1 1 {} {0.504718651849 0.252003295324 0.205102269435} H29 59 1 1 {} {0.493620690198 0.250695308122 0.321234987144} H30 60 1 1 {} {0.592968598252 0.151541066212 0.383986259133} H31 61 1 1 {} {0.591428576113 0.197529374499 0.153422954917} H32 62 1 1 {} {0.674490984936 0.452242228413 0.541313541091} H33 63 1 1 {} {0.684134340997 0.480613425935 0.383961781021} H34 64 1 1 {} {0.615906726291 0.651843970982 0.604606514321} H35 65 1 1 {} {0.627060271707 0.536692788387 0.659716649582} H36 66 1 1 {} {0.56328180783 0.615025266385 0.416315180769} H37 67 1 1 {} {0.630033073212 0.684538008309 0.426599609377} H38 68 1 1 {} {0.607650277005 0.558033152699 0.268927307855} H39 69 1 1 {} {0.655725649971 0.599992666751 0.274813548708} H40 70 1 1 {} {0.717588293878 0.572378768723 0.652220670948} H41 71 1 1 {} {0.713211406335 0.6486611457 0.607232694042} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end