iterations/neb0_image02_iter3.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351118419022 0.555097507402 0.421885059842} C1 1 1 14 {} {0.33200948223 0.522064494817 0.532964241408} Si1 2 1 14 {} {0.406313394264 0.597202769599 0.417723002968} Si2 3 1 8 {} {0.335321864342 0.582349265914 0.60820845304} O1 4 1 8 {} {0.27918498987 0.500097389268 0.524996897383} O2 5 1 6 {} {0.363711337949 0.446106095046 0.568345532873} C2 6 1 6 {} {0.455429995882 0.539603223294 0.411425604956} C3 7 1 8 {} {0.40795482177 0.641625246233 0.51278765148} O3 8 1 8 {} {0.406671224001 0.648100029165 0.32991486235} O4 9 1 14 {} {0.226787511194 0.505652903041 0.555644244916} Si3 10 1 7 {} {0.207175711003 0.426995829436 0.587051271061} N1 11 1 14 {} {0.171131398003 0.422671380647 0.67887441162} Si4 12 1 14 {} {0.222769670501 0.35699584437 0.523061412352} Si5 13 1 7 {} {0.223993114995 0.369320488017 0.409500139326} N2 14 1 7 {} {0.123624426178 0.470961876124 0.671736546348} N3 15 1 1 {} {0.350656964957 0.514651366476 0.371859132034} H1 16 1 1 {} {0.326175605068 0.592246402703 0.399893798753} H2 17 1 1 {} {0.359095596309 0.614488009256 0.595157534647} H3 18 1 1 {} {0.360380657935 0.405116577244 0.519845307171} H4 19 1 1 {} {0.351028514477 0.428057330506 0.632844248458} H5 20 1 1 {} {0.399417591549 0.457091757967 0.576634648809} H6 21 1 1 {} {0.487198682274 0.567250457455 0.410657284582} H7 22 1 1 {} {0.453991982225 0.509011937755 0.350457374424} H8 23 1 1 {} {0.456383242953 0.505437475631 0.468865878126} H9 24 1 1 {} {0.433196151971 0.670930852102 0.523088018049} H10 25 1 1 {} {0.435010516099 0.656899164869 0.301139970688} H11 26 1 1 {} {0.221034275884 0.551357331138 0.633626462299} H12 27 1 1 {} {0.201297895381 0.532259145829 0.477910509737} H13 28 1 1 {} {0.158244829133 0.350929973739 0.687036416735} H14 29 1 1 {} {0.194170799073 0.446976065133 0.760804484003} H15 30 1 1 {} {0.26870134512 0.335281718523 0.548018713212} H16 31 1 1 {} {0.189640380215 0.30355602491 0.543394562361} H17 32 1 1 {} {0.250422172985 0.393342445478 0.381560413618} H18 33 1 1 {} {0.195518427258 0.380009425246 0.375499052853} H19 34 1 1 {} {0.123432339219 0.518553254739 0.695493681071} H20 35 1 1 {} {0.10095408889 0.465029315341 0.621951693878} H21 36 1 6 {} {0.590858682232 0.327590524553 0.309990176798} C4 37 1 14 {} {0.586067694653 0.361072487602 0.426957488852} Si6 38 1 14 {} {0.574904072957 0.23850070928 0.292042327002} Si7 39 1 8 {} {0.614703155721 0.312070441028 0.494981332453} O5 40 1 8 {} {0.608736616823 0.43620892491 0.431968025785} O6 41 1 6 {} {0.526832138623 0.369855926718 0.463600663293} C5 42 1 6 {} {0.514008729185 0.227885218648 0.268422287138} C6 43 1 8 {} {0.590182840489 0.199851194787 0.386338493823} O7 44 1 8 {} {0.604626894825 0.201513501204 0.212190940173} O8 45 1 14 {} {0.652468829933 0.480990972734 0.460718517623} Si8 46 1 7 {} {0.636902706371 0.562097041845 0.48735747694} N4 47 1 14 {} {0.643437141267 0.589783148508 0.598232688089} Si9 48 1 14 {} {0.612998832711 0.615784410706 0.408790327356} Si10 49 1 7 {} {0.624125745766 0.596643663339 0.298520055273} N5 50 1 7 {} {0.696144835507 0.609453367152 0.63417647442} N6 51 1 1 {} {0.571437616728 0.35934491513 0.264025079258} H22 52 1 1 {} {0.626184544222 0.332718505377 0.290385732217} H23 53 1 1 {} {0.613155210183 0.264938322945 0.477496366171} H24 54 1 1 {} {0.50770310318 0.40282472757 0.419026162001} H25 55 1 1 {} {0.525605857654 0.391321273763 0.531104600383} H26 56 1 1 {} {0.510036020442 0.320936608681 0.465964455536} H27 57 1 1 {} {0.504668934965 0.174774440658 0.263775757513} H28 58 1 1 {} {0.504768648412 0.252058784587 0.205061770891} H29 59 1 1 {} {0.493581937919 0.250801767116 0.321158207244} H30 60 1 1 {} {0.592852405275 0.151512783007 0.384088264743} H31 61 1 1 {} {0.591412139619 0.197483090626 0.153448299345} H32 62 1 1 {} {0.674459995753 0.452219972121 0.541257800082} H33 63 1 1 {} {0.684179945942 0.480608885127 0.383976138886} H34 64 1 1 {} {0.615915749703 0.651908075981 0.60478356906} H35 65 1 1 {} {0.627063930393 0.536726061717 0.659992042388} H36 66 1 1 {} {0.563353461859 0.614862344831 0.416361706884} H37 67 1 1 {} {0.630012676768 0.684538698911 0.426854164832} H38 68 1 1 {} {0.607780413675 0.55795551765 0.269068684126} H39 69 1 1 {} {0.655773321013 0.600034479299 0.274790354659} H40 70 1 1 {} {0.717575645574 0.572352732881 0.652192659165} H41 71 1 1 {} {0.713162073358 0.648582425876 0.607128705986} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end