iterations/neb0_image02_iter6.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image02 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.351097833197 0.555082150444 0.421910069258} C1 1 1 14 {} {0.332056531379 0.522080787729 0.532962167673} Si1 2 1 14 {} {0.406336350345 0.597210057423 0.417703970309} Si2 3 1 8 {} {0.335316483137 0.582327060146 0.608213979599} O1 4 1 8 {} {0.279090303109 0.500066024291 0.525012327866} O2 5 1 6 {} {0.363702284881 0.446106636666 0.568348623139} C2 6 1 6 {} {0.455414876477 0.539608250265 0.411435305327} C3 7 1 8 {} {0.407943001932 0.641620863836 0.512790489345} O3 8 1 8 {} {0.406659831568 0.648104926766 0.329930353209} O4 9 1 14 {} {0.226825881057 0.505683905251 0.555606100239} Si3 10 1 7 {} {0.207173457669 0.426977982564 0.587050873066} N1 11 1 14 {} {0.171131786547 0.422657526339 0.678915650156} Si4 12 1 14 {} {0.222781004919 0.356956453426 0.523053765959} Si5 13 1 7 {} {0.22398797919 0.369321753287 0.409463388361} N2 14 1 7 {} {0.123612460729 0.470968389845 0.671731457105} N3 15 1 1 {} {0.350658873675 0.514656016403 0.371865222929} H1 16 1 1 {} {0.326174641852 0.592240489808 0.399891042981} H2 17 1 1 {} {0.359104558163 0.614495772759 0.59514886855} H3 18 1 1 {} {0.360380151047 0.40511017594 0.519847225709} H4 19 1 1 {} {0.351030022506 0.428050130903 0.632850944087} H5 20 1 1 {} {0.399419881454 0.457092556542 0.576634317521} H6 21 1 1 {} {0.487204033598 0.567256637905 0.410659000388} H7 22 1 1 {} {0.453993469807 0.509013342768 0.350457544093} H8 23 1 1 {} {0.456385019055 0.505437476221 0.468867186965} H9 24 1 1 {} {0.433199709137 0.670943668516 0.523086633788} H10 25 1 1 {} {0.43501583473 0.656895804017 0.301133856604} H11 26 1 1 {} {0.22103593368 0.551351889833 0.633617105891} H12 27 1 1 {} {0.201301566582 0.532257654446 0.47790964246} H13 28 1 1 {} {0.158251407253 0.350947303207 0.687038491846} H14 29 1 1 {} {0.194175460719 0.446985246916 0.760796047928} H15 30 1 1 {} {0.268693588322 0.335289018569 0.548010952241} H16 31 1 1 {} {0.189643233506 0.30356772192 0.543391344267} H17 32 1 1 {} {0.250420751338 0.393337899402 0.381557287868} H18 33 1 1 {} {0.195518104562 0.380010949543 0.37550067284} H19 34 1 1 {} {0.1234354626 0.518561848641 0.695495255957} H20 35 1 1 {} {0.100955884664 0.465027683764 0.621958213082} H21 36 1 6 {} {0.590853681421 0.327582553807 0.309980396098} C4 37 1 14 {} {0.586086994445 0.36113575502 0.426949027371} Si6 38 1 14 {} {0.574910748106 0.238533002088 0.292049628695} Si7 39 1 8 {} {0.614707206832 0.312048743803 0.495003993829} O5 40 1 8 {} {0.608717116208 0.436126179793 0.431976239303} O6 41 1 6 {} {0.526824329979 0.369851566556 0.463591731283} C5 42 1 6 {} {0.514009315226 0.227874546271 0.268425738121} C6 43 1 8 {} {0.590175581075 0.199855262148 0.386328441496} O7 44 1 8 {} {0.604629632998 0.201528176984 0.212156873766} O8 45 1 14 {} {0.652452458774 0.481036508768 0.460613246592} Si8 46 1 7 {} {0.636978167657 0.562080556 0.487784949324} N4 47 1 14 {} {0.64323983585 0.589655393759 0.597936818636} Si9 48 1 14 {} {0.613043985845 0.615746932664 0.408329559564} Si10 49 1 7 {} {0.624035388855 0.596704036148 0.29891045755} N5 50 1 7 {} {0.696335128703 0.609527810023 0.634254697144} N6 51 1 1 {} {0.571439020099 0.359350079838 0.264026553104} H22 52 1 1 {} {0.626186074809 0.332721670375 0.290389683489} H23 53 1 1 {} {0.613158009197 0.264936818865 0.47749301928} H24 54 1 1 {} {0.507705966214 0.402827278077 0.419025372953} H25 55 1 1 {} {0.525604786957 0.391324975516 0.531113186236} H26 56 1 1 {} {0.510036945954 0.320948351036 0.465956840636} H27 57 1 1 {} {0.504675332091 0.174772452096 0.263782182719} H28 58 1 1 {} {0.504763724888 0.252054646732 0.205065215338} H29 59 1 1 {} {0.493587018672 0.250789945591 0.321162396691} H30 60 1 1 {} {0.592864731481 0.151509259165 0.384081643979} H31 61 1 1 {} {0.591418582718 0.197489778443 0.153467938863} H32 62 1 1 {} {0.67447093453 0.452218383625 0.541301760368} H33 63 1 1 {} {0.684173979045 0.480603431095 0.383996461144} H34 64 1 1 {} {0.61593064667 0.651886752983 0.604780969921} H35 65 1 1 {} {0.627079156237 0.53675719428 0.659940760001} H36 66 1 1 {} {0.563309174246 0.614886228119 0.416369463989} H37 67 1 1 {} {0.63001796583 0.684567412796 0.426852354912} H38 68 1 1 {} {0.607774307326 0.557937098549 0.269040751414} H39 69 1 1 {} {0.655820710643 0.600022367945 0.274737780157} H40 70 1 1 {} {0.717549650402 0.572383665318 0.652190806217} H41 71 1 1 {} {0.713138022815 0.648549457457 0.607173991935} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end