iterations/neb0_image03_iter10.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.352967123659 0.550247537095 0.422167626596} C1 1 1 14 {} {0.333916232523 0.517233365053 0.533248852831} Si1 2 1 14 {} {0.408185318162 0.592468562516 0.417944080669} Si2 3 1 8 {} {0.337167236902 0.577512223975 0.608487944305} O1 4 1 8 {} {0.280964374597 0.495315201697 0.525262574187} O2 5 1 6 {} {0.365555267177 0.441268768242 0.568641960962} C2 6 1 6 {} {0.457226853451 0.534869977762 0.411696820525} C3 7 1 8 {} {0.409819716694 0.636740677253 0.513096533785} O3 8 1 8 {} {0.408498597984 0.643370218717 0.330187732299} O4 9 1 14 {} {0.228686574703 0.50086226957 0.555895968181} Si3 10 1 7 {} {0.209037396794 0.422139171765 0.587317720575} N1 11 1 14 {} {0.172980760728 0.417854254202 0.679103070402} Si4 12 1 14 {} {0.224603829435 0.352143514317 0.523321315058} Si5 13 1 7 {} {0.225826228128 0.364605439083 0.409773083624} N2 14 1 7 {} {0.12546308801 0.466183919621 0.672008467611} N3 15 1 1 {} {0.35251477874 0.509813237598 0.372130081191} H1 16 1 1 {} {0.328017806498 0.587379090446 0.400168801463} H2 17 1 1 {} {0.360949431208 0.609672834898 0.595417535968} H3 18 1 1 {} {0.362225036109 0.400277845831 0.520133922254} H4 19 1 1 {} {0.352882734767 0.423208476275 0.633135512011} H5 20 1 1 {} {0.401270689142 0.452250575937 0.57690430774} H6 21 1 1 {} {0.489040568096 0.562444448615 0.410962179839} H7 22 1 1 {} {0.455817144518 0.504224174382 0.350758129001} H8 23 1 1 {} {0.458187911024 0.500695401238 0.469113969285} H9 24 1 1 {} {0.435034444797 0.666123990278 0.52336041645} H10 25 1 1 {} {0.436858419824 0.652085089054 0.30140890444} H11 26 1 1 {} {0.222895749249 0.546524974346 0.633884734026} H12 27 1 1 {} {0.203162043071 0.527431969673 0.478175392842} H13 28 1 1 {} {0.16010704808 0.346121196724 0.687319134288} H14 29 1 1 {} {0.1960255364 0.442159815501 0.761045000888} H15 30 1 1 {} {0.270524725893 0.330457887152 0.548255856208} H16 31 1 1 {} {0.191486001455 0.298734128936 0.543667829266} H17 32 1 1 {} {0.252283015784 0.388521318205 0.381812328454} H18 33 1 1 {} {0.197353470757 0.37519706364 0.375765710564} H19 34 1 1 {} {0.125291143034 0.513780735049 0.695773205523} H20 35 1 1 {} {0.102807835534 0.46019001707 0.622234076273} H21 36 1 6 {} {0.589009636045 0.332401638321 0.309720267283} C4 37 1 14 {} {0.58423939145 0.365930650114 0.426735482775} Si6 38 1 14 {} {0.573052465877 0.243336868509 0.291727157702} Si7 39 1 8 {} {0.612911058977 0.31688267176 0.494747418908} O5 40 1 8 {} {0.606854393742 0.440993810136 0.431680776611} O6 41 1 6 {} {0.525003947021 0.374585274846 0.463333875092} C5 42 1 6 {} {0.512164479102 0.232703494424 0.268170748059} C6 43 1 8 {} {0.588251568358 0.204688759028 0.386050757606} O7 44 1 8 {} {0.602733111353 0.206278862996 0.211896975994} O8 45 1 14 {} {0.650624905317 0.485807591385 0.460352724678} Si8 46 1 7 {} {0.635079588584 0.566845172773 0.487363249522} N4 47 1 14 {} {0.641564898708 0.594556856334 0.59770874985} Si9 48 1 14 {} {0.611159521367 0.620549265469 0.408519052768} Si10 49 1 7 {} {0.622230905723 0.601425450751 0.298688642084} N5 50 1 7 {} {0.694424963425 0.614343240539 0.634083377583} N6 51 1 1 {} {0.569596263259 0.364172207103 0.263754232278} H22 52 1 1 {} {0.624338754807 0.337549804672 0.290122855059} H23 53 1 1 {} {0.611313612194 0.269766675939 0.477216663882} H24 54 1 1 {} {0.505927466593 0.407544814723 0.418761535928} H25 55 1 1 {} {0.523757401027 0.39612626583 0.530800998729} H26 56 1 1 {} {0.508195371107 0.325719745404 0.465687646717} H27 57 1 1 {} {0.502844329245 0.179595473791 0.263534149634} H28 58 1 1 {} {0.502908842301 0.256862648133 0.204813848914} H29 59 1 1 {} {0.491747062492 0.255595974018 0.320922916091} H30 60 1 1 {} {0.591038426709 0.156360927062 0.383806509305} H31 61 1 1 {} {0.589569381343 0.202314719075 0.153149449667} H32 62 1 1 {} {0.672634358838 0.457056360881 0.541043314052} H33 63 1 1 {} {0.682319986579 0.485439230426 0.383714963234} H34 64 1 1 {} {0.614056642689 0.656665238246 0.604433134018} H35 65 1 1 {} {0.625213971013 0.541580022215 0.65950718682} H36 66 1 1 {} {0.561434918233 0.619757063389 0.416035582902} H37 67 1 1 {} {0.628176891534 0.68941027132 0.426456097289} H38 68 1 1 {} {0.605895682321 0.562770928634 0.268682620139} H39 69 1 1 {} {0.65396129124 0.604838719746 0.274423157678} H40 70 1 1 {} {0.715695124423 0.57722019815 0.651905469667} H41 71 1 1 {} {0.711267218314 0.653340068018 0.606953915361} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end