iterations/neb0_image03_iter12.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.352974934772 0.550240250989 0.422171855324} C1 1 1 14 {} {0.333903892982 0.517218937609 0.533244569816} Si1 2 1 14 {} {0.40817815141 0.592475663197 0.417936473572} Si2 3 1 8 {} {0.337181139892 0.577520355229 0.608493039146} O1 4 1 8 {} {0.281006555967 0.495327960842 0.525246220773} O2 5 1 6 {} {0.365558373923 0.44126005773 0.568648130736} C2 6 1 6 {} {0.457226368253 0.534886705057 0.411688903912} C3 7 1 8 {} {0.409828056355 0.636730379319 0.513116563904} O3 8 1 8 {} {0.408501254334 0.643404981671 0.330181018031} O4 9 1 14 {} {0.228664733877 0.500862878928 0.555902630509} Si3 10 1 7 {} {0.209044173697 0.422134631123 0.587314817589} N1 11 1 14 {} {0.172983722093 0.417855911663 0.6790996966} Si4 12 1 14 {} {0.224602875864 0.352141756258 0.523318277109} Si5 13 1 7 {} {0.22583030037 0.364625869532 0.409775530626} N2 14 1 7 {} {0.125470506026 0.466195671651 0.672026379793} N3 15 1 1 {} {0.35252099112 0.509807336742 0.372133966414} H1 16 1 1 {} {0.328015434403 0.587363076773 0.400171033762} H2 17 1 1 {} {0.360944535061 0.609660573722 0.59541990131} H3 18 1 1 {} {0.362225472671 0.400270003089 0.52014162661} H4 19 1 1 {} {0.352886531654 0.423196421866 0.633147252617} H5 20 1 1 {} {0.401272555691 0.452241804871 0.576905409887} H6 21 1 1 {} {0.489037779945 0.562447793948 0.410972865834} H7 22 1 1 {} {0.455811732793 0.504236742408 0.350769316047} H8 23 1 1 {} {0.458174433146 0.500719705372 0.469111886335} H9 24 1 1 {} {0.435031938461 0.666128817753 0.523363273197} H10 25 1 1 {} {0.436854429005 0.652085230182 0.301411031722} H11 26 1 1 {} {0.222902403144 0.54652042911 0.633882167471} H12 27 1 1 {} {0.203170097112 0.527428668809 0.478177398961} H13 28 1 1 {} {0.160114387264 0.346128307875 0.687323981327} H14 29 1 1 {} {0.196029765429 0.442162092088 0.76103383168} H15 30 1 1 {} {0.270521471777 0.330452940701 0.548243375103} H16 31 1 1 {} {0.191485674035 0.298729626415 0.543668322714} H17 32 1 1 {} {0.252286269829 0.388519703111 0.381805820481} H18 33 1 1 {} {0.197346370123 0.375203590698 0.375755468737} H19 34 1 1 {} {0.125296194831 0.513787594134 0.695768257623} H20 35 1 1 {} {0.102806784777 0.460186309227 0.62223132745} H21 36 1 6 {} {0.589010201853 0.332409122791 0.309716865933} C4 37 1 14 {} {0.584243827725 0.365902283239 0.426749494452} Si6 38 1 14 {} {0.573046243038 0.243339229343 0.291726314081} Si7 39 1 8 {} {0.6129216532 0.316899775501 0.49474963391} O5 40 1 8 {} {0.606861112565 0.441015721462 0.431681906038} O6 41 1 6 {} {0.525012380719 0.37456798392 0.463339836027} C5 42 1 6 {} {0.512163215067 0.232706586986 0.268173418059} C6 43 1 8 {} {0.588225561404 0.204700681579 0.386044217072} O7 44 1 8 {} {0.602726994882 0.206269725844 0.21190456986} O8 45 1 14 {} {0.650614428118 0.485778064841 0.460354758169} Si8 46 1 7 {} {0.635077687944 0.566827609162 0.487384589519} N4 47 1 14 {} {0.641602427817 0.594570254838 0.597736113008} Si9 48 1 14 {} {0.611146870062 0.620557198633 0.408578721042} Si10 49 1 7 {} {0.622299436426 0.601311091859 0.298606799923} N5 50 1 7 {} {0.694311280512 0.614330861132 0.634152319667} N6 51 1 1 {} {0.56959697736 0.364175717873 0.263756351455} H22 52 1 1 {} {0.624336098109 0.337554091069 0.290125832862} H23 53 1 1 {} {0.611314235852 0.269759123352 0.477209298075} H24 54 1 1 {} {0.505941861452 0.407524453237 0.418748039905} H25 55 1 1 {} {0.523754518303 0.396122020743 0.530798445632} H26 56 1 1 {} {0.508193460914 0.325699473363 0.465685094385} H27 57 1 1 {} {0.502851065279 0.179591822819 0.26354348933} H28 58 1 1 {} {0.502899891697 0.256858934323 0.20481792645} H29 59 1 1 {} {0.491749216196 0.255587622684 0.320935789973} H30 60 1 1 {} {0.59104944213 0.156367968894 0.383798221914} H31 61 1 1 {} {0.589564271734 0.202319334958 0.153118196963} H32 62 1 1 {} {0.672636258812 0.457065952835 0.541043636342} H33 63 1 1 {} {0.682316065943 0.485444134784 0.383702970905} H34 64 1 1 {} {0.614053303436 0.656641807578 0.604393013013} H35 65 1 1 {} {0.625211799216 0.54159190856 0.659425288865} H36 66 1 1 {} {0.56141126058 0.619784267398 0.416023121372} H37 67 1 1 {} {0.628177556173 0.689416702496 0.426411391642} H38 68 1 1 {} {0.605903889894 0.562855504913 0.268714623669} H39 69 1 1 {} {0.653872589517 0.604832978955 0.274483602087} H40 70 1 1 {} {0.715737193445 0.577155702608 0.651938034814} H41 71 1 1 {} {0.711307394938 0.653431846884 0.606912726406} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end