iterations/neb0_image03_iter13.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.352976110905 0.550240080199 0.422171802177} C1 1 1 14 {} {0.333897409383 0.517217374748 0.533237690982} Si1 2 1 14 {} {0.408174233393 0.592465980328 0.417937488607} Si2 3 1 8 {} {0.337184819118 0.577526813895 0.608494364813} O1 4 1 8 {} {0.281030787491 0.495328403666 0.525240540595} O2 5 1 6 {} {0.365558377211 0.441260621516 0.568646047487} C2 6 1 6 {} {0.457231706744 0.53488168573 0.411684825208} C3 7 1 8 {} {0.409826977205 0.636735443697 0.51312235096} O3 8 1 8 {} {0.408503617944 0.643407775519 0.330178835195} O4 9 1 14 {} {0.228650460855 0.500866278186 0.555903812282} Si3 10 1 7 {} {0.209043275037 0.422137880959 0.587313604922} N1 11 1 14 {} {0.172984205476 0.41785078034 0.67910741003} Si4 12 1 14 {} {0.224604296998 0.352143878669 0.523326528751} Si5 13 1 7 {} {0.225832674465 0.364623401484 0.409775446929} N2 14 1 7 {} {0.125474763398 0.466195260006 0.672029984968} N3 15 1 1 {} {0.352521941948 0.5098076988 0.372135143759} H1 16 1 1 {} {0.328013665741 0.587364227689 0.400170731456} H2 17 1 1 {} {0.360941034396 0.609654979166 0.595421498366} H3 18 1 1 {} {0.362225555162 0.400269522801 0.520141846799} H4 19 1 1 {} {0.352886641367 0.423195574196 0.633149637445} H5 20 1 1 {} {0.401271321003 0.452241343876 0.57690557379} H6 21 1 1 {} {0.489036385951 0.562448307781 0.410972011714} H7 22 1 1 {} {0.455811491813 0.504238704812 0.35076919248} H8 23 1 1 {} {0.458172800076 0.500721509491 0.469113142227} H9 24 1 1 {} {0.435032468545 0.66612992237 0.523364180006} H10 25 1 1 {} {0.43685203827 0.652085446331 0.301411991785} H11 26 1 1 {} {0.2229020644 0.546519976451 0.633883826954} H12 27 1 1 {} {0.203169977623 0.527427506717 0.478180233789} H13 28 1 1 {} {0.160114281219 0.346131868856 0.687322953364} H14 29 1 1 {} {0.196029510072 0.442162474815 0.761031115335} H15 30 1 1 {} {0.270522556026 0.330451881862 0.548242571165} H16 31 1 1 {} {0.191484525659 0.298728084253 0.543666911577} H17 32 1 1 {} {0.252285583232 0.38852008184 0.381804344257} H18 33 1 1 {} {0.197344003215 0.375206061728 0.375749547305} H19 34 1 1 {} {0.125295380224 0.513784643563 0.695764117466} H20 35 1 1 {} {0.10280464217 0.460188943759 0.622229230427} H21 36 1 6 {} {0.589011350115 0.332411391227 0.3097133861} C4 37 1 14 {} {0.584245702423 0.365892414045 0.426748577355} Si6 38 1 14 {} {0.57304425622 0.243334700212 0.291736946354} Si7 39 1 8 {} {0.612920005191 0.316907138081 0.49474498916} O5 40 1 8 {} {0.606868900259 0.441026609793 0.431687224014} O6 41 1 6 {} {0.525013163887 0.374570392506 0.463340868497} C5 42 1 6 {} {0.512161784185 0.23270761835 0.268172830364} C6 43 1 8 {} {0.588226963713 0.204703528568 0.386045067569} O7 44 1 8 {} {0.602731089017 0.206269276884 0.211908195936} O8 45 1 14 {} {0.650608441787 0.48576774456 0.460360910485} Si8 46 1 7 {} {0.635081250413 0.566832447048 0.487398243525} N4 47 1 14 {} {0.641590203864 0.594565122491 0.597760464744} Si9 48 1 14 {} {0.611152052571 0.620564184686 0.408521315692} Si10 49 1 7 {} {0.622328896083 0.601272123743 0.298529711055} N5 50 1 7 {} {0.694257350924 0.614320182404 0.634159969885} N6 51 1 1 {} {0.569597670302 0.36417563977 0.263759414505} H22 52 1 1 {} {0.624335247313 0.337554220587 0.290126571586} H23 53 1 1 {} {0.611314615264 0.269753622279 0.477208762339} H24 54 1 1 {} {0.505939726191 0.40752806471 0.418741065623} H25 55 1 1 {} {0.52375452863 0.396121705636 0.530804069246} H26 56 1 1 {} {0.508192504521 0.325693360647 0.465686810603} H27 57 1 1 {} {0.50285154212 0.179589970184 0.263543442983} H28 58 1 1 {} {0.50289833874 0.256860251185 0.204814880871} H29 59 1 1 {} {0.491748874215 0.255588516669 0.320937012835} H30 60 1 1 {} {0.591049371339 0.156367166718 0.383796387355} H31 61 1 1 {} {0.589562423246 0.20231912243 0.153110304871} H32 62 1 1 {} {0.672634938016 0.457066754438 0.541037408751} H33 63 1 1 {} {0.682318463461 0.485442821829 0.383697157404} H34 64 1 1 {} {0.614057721209 0.656639929697 0.604388639779} H35 65 1 1 {} {0.625214524492 0.541593629748 0.659424615403} H36 66 1 1 {} {0.561409647093 0.619784112259 0.416032830557} H37 67 1 1 {} {0.628175741018 0.68941070889 0.426419992583} H38 68 1 1 {} {0.605917659031 0.562898849965 0.268755559057} H39 69 1 1 {} {0.653825065921 0.604831773767 0.274532960066} H40 70 1 1 {} {0.715765134881 0.577113652766 0.651960140883} H41 71 1 1 {} {0.711335233437 0.653487173798 0.60687901225} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end