iterations/neb0_image03_iter22.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.352993982935 0.55022291244 0.422170907943} C1 1 1 14 {} {0.333930586803 0.517212400854 0.5332580219} Si1 2 1 14 {} {0.408158981154 0.592503443586 0.417924054862} Si2 3 1 8 {} {0.337201476831 0.577490722798 0.608514946461} O1 4 1 8 {} {0.281033222756 0.495345233911 0.525217765752} O2 5 1 6 {} {0.365563385284 0.441229964372 0.568675009296} C2 6 1 6 {} {0.457224915454 0.534937590109 0.41166353119} C3 7 1 8 {} {0.409844355228 0.636699236523 0.513184495762} O3 8 1 8 {} {0.408490392915 0.643522963058 0.330224587614} O4 9 1 14 {} {0.228677721968 0.500846343662 0.555874900199} Si3 10 1 7 {} {0.209055956973 0.422137826494 0.587311781916} N1 11 1 14 {} {0.17300001016 0.417860543263 0.679116083578} Si4 12 1 14 {} {0.224604353048 0.352147293823 0.523324671114} Si5 13 1 7 {} {0.225818191701 0.364692673718 0.409771004696} N2 14 1 7 {} {0.125494454259 0.466207126003 0.672033996133} N3 15 1 1 {} {0.352553533175 0.509780482987 0.372152959937} H1 16 1 1 {} {0.328001626528 0.587296310582 0.40018373648} H2 17 1 1 {} {0.360960084864 0.60964991777 0.595412838388} H3 18 1 1 {} {0.362228117621 0.400232691022 0.520172417522} H4 19 1 1 {} {0.35290607439 0.423151110056 0.633187750849} H5 20 1 1 {} {0.401277648177 0.452203543905 0.576912774182} H6 21 1 1 {} {0.489036319751 0.562482333388 0.4110039664} H7 22 1 1 {} {0.455793119899 0.504277232115 0.350769097001} H8 23 1 1 {} {0.458111603482 0.500818119524 0.469123250994} H9 24 1 1 {} {0.435029326465 0.666158613558 0.523376970783} H10 25 1 1 {} {0.436854515383 0.652097023016 0.301394691144} H11 26 1 1 {} {0.222924475911 0.54650644944 0.633887946206} H12 27 1 1 {} {0.203190636427 0.527421368775 0.47816323429} H13 28 1 1 {} {0.160138523653 0.346156003637 0.687338313911} H14 29 1 1 {} {0.196052429554 0.442178006772 0.760993384812} H15 30 1 1 {} {0.270521577736 0.330422285405 0.54819340929} H16 31 1 1 {} {0.19148008099 0.298710222398 0.543657705779} H17 32 1 1 {} {0.252299282603 0.388521448235 0.381763561242} H18 33 1 1 {} {0.197339351435 0.375235823615 0.375715383856} H19 34 1 1 {} {0.125314454484 0.513816375243 0.695735759771} H20 35 1 1 {} {0.102819247372 0.460195483008 0.622276331371} H21 36 1 6 {} {0.589011929203 0.332420166144 0.309709760476} C4 37 1 14 {} {0.58426565918 0.36586646313 0.426753682107} Si6 38 1 14 {} {0.573019049641 0.243341929824 0.291707334693} Si7 39 1 8 {} {0.612971887918 0.316891219594 0.494736080043} O5 40 1 8 {} {0.606846890085 0.441009251547 0.431681970292} O6 41 1 6 {} {0.525028769214 0.374493381867 0.463356153063} C5 42 1 6 {} {0.51214343462 0.232713274419 0.268173827823} C6 43 1 8 {} {0.588144827679 0.20472211151 0.386069096636} O7 44 1 8 {} {0.602696648642 0.206230616366 0.211873490878} O8 45 1 14 {} {0.6506079744 0.485740077349 0.460391514508} Si8 46 1 7 {} {0.635060334306 0.566829969563 0.487375982074} N4 47 1 14 {} {0.641550340423 0.594568909392 0.597780825815} Si9 48 1 14 {} {0.611141262931 0.620528141597 0.408444640108} Si10 49 1 7 {} {0.622322397366 0.601098016947 0.298899769304} N5 50 1 7 {} {0.694348250401 0.614434504918 0.634405058174} N6 51 1 1 {} {0.569598157437 0.36420301925 0.263775090477} H22 52 1 1 {} {0.62433405155 0.337572527303 0.290129774661} H23 53 1 1 {} {0.611325050973 0.269767846004 0.477211689831} H24 54 1 1 {} {0.505994592456 0.407449838185 0.418671039056} H25 55 1 1 {} {0.523743510537 0.396095042461 0.530811810172} H26 56 1 1 {} {0.508194965775 0.325617309092 0.46568893218} H27 57 1 1 {} {0.502880879587 0.179574336068 0.263580140743} H28 58 1 1 {} {0.502852702647 0.256851297068 0.204822067557} H29 59 1 1 {} {0.491751218672 0.255562077077 0.320995643945} H30 60 1 1 {} {0.591091389192 0.156415989805 0.383755013461} H31 61 1 1 {} {0.589555992639 0.202347131874 0.153062928133} H32 62 1 1 {} {0.672640962972 0.457088228683 0.541028187711} H33 63 1 1 {} {0.682303247023 0.485448243213 0.383658777492} H34 64 1 1 {} {0.614046806987 0.656581094656 0.604221900823} H35 65 1 1 {} {0.625192955497 0.541572729906 0.65920558739} H36 66 1 1 {} {0.561355788435 0.619886951415 0.416010081942} H37 67 1 1 {} {0.628170094166 0.689400867221 0.426276168549} H38 68 1 1 {} {0.605829539306 0.562968103317 0.268667137175} H39 69 1 1 {} {0.653821527422 0.604840428695 0.274530055203} H40 70 1 1 {} {0.715746156377 0.57714414469 0.651953403279} H41 71 1 1 {} {0.711318707085 0.653483999656 0.606990389248} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end