iterations/neb0_image03_iter23.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.352992457656 0.550221785826 0.422171843409} C1 1 1 14 {} {0.333936064796 0.517211484812 0.533257671518} Si1 2 1 14 {} {0.408163220735 0.592507176876 0.417924784503} Si2 3 1 8 {} {0.33720579807 0.577494817001 0.608516712867} O1 4 1 8 {} {0.281026188459 0.495342760084 0.525218322789} O2 5 1 6 {} {0.365562282634 0.44122690199 0.568675853786} C2 6 1 6 {} {0.457222386724 0.534941259809 0.4116603779} C3 7 1 8 {} {0.409844969868 0.636700877906 0.513187952682} O3 8 1 8 {} {0.408494407552 0.643529169219 0.330227655705} O4 9 1 14 {} {0.228685917288 0.500849896726 0.555871945047} Si3 10 1 7 {} {0.209055060761 0.422137719627 0.58731316597} N1 11 1 14 {} {0.17300120339 0.417861587915 0.679117950037} Si4 12 1 14 {} {0.224603813394 0.352146672405 0.523323990432} Si5 13 1 7 {} {0.225820844013 0.364696363365 0.409771795215} N2 14 1 7 {} {0.125498177241 0.46621121546 0.672038364226} N3 15 1 1 {} {0.352556308737 0.509778155164 0.372154018041} H1 16 1 1 {} {0.327999961418 0.58729292998 0.400184200018} H2 17 1 1 {} {0.360958808986 0.60964533702 0.595414244225} H3 18 1 1 {} {0.362228368892 0.400231045291 0.520175037805} H4 19 1 1 {} {0.352907634713 0.423149502688 0.633188618842} H5 20 1 1 {} {0.401278498102 0.452201088757 0.576913732147} H6 21 1 1 {} {0.489037628848 0.562486715798 0.411004218696} H7 22 1 1 {} {0.455792900201 0.504278357537 0.350764915394} H8 23 1 1 {} {0.458107671243 0.500821707105 0.469127944168} H9 24 1 1 {} {0.43502749199 0.666158456097 0.523376599483} H10 25 1 1 {} {0.436848862531 0.652096608885 0.30139896365} H11 26 1 1 {} {0.22292541572 0.546504396831 0.633887108987} H12 27 1 1 {} {0.203190691606 0.527421085596 0.478160642644} H13 28 1 1 {} {0.160139157947 0.346156054027 0.687338914725} H14 29 1 1 {} {0.196054914688 0.442180229012 0.760993575855} H15 30 1 1 {} {0.2705227043 0.330419888021 0.548190389192} H16 31 1 1 {} {0.191480246764 0.298710731965 0.543655327545} H17 32 1 1 {} {0.252296627692 0.38851950596 0.381762718355} H18 33 1 1 {} {0.197338538266 0.375239557841 0.375710324507} H19 34 1 1 {} {0.125315712617 0.513813288043 0.69573070481} H20 35 1 1 {} {0.102818137697 0.460196728682 0.622276345425} H21 36 1 6 {} {0.589010911383 0.332416145993 0.309707909692} C4 37 1 14 {} {0.584267411319 0.365872634639 0.426752070678} Si6 38 1 14 {} {0.573019725172 0.243342195788 0.291703625943} Si7 39 1 8 {} {0.612975163804 0.316897546715 0.494735650704} O5 40 1 8 {} {0.606844260924 0.440999671278 0.43168515956} O6 41 1 6 {} {0.52502701717 0.374488561939 0.463360087246} C5 42 1 6 {} {0.512140393386 0.232712110495 0.268172945711} C6 43 1 8 {} {0.58814229299 0.204727257414 0.386072275062} O7 44 1 8 {} {0.602695838595 0.20623042631 0.211881882812} O8 45 1 14 {} {0.650607250376 0.485754638415 0.460377467521} Si8 46 1 7 {} {0.635064280568 0.566833440008 0.487398829752} N4 47 1 14 {} {0.641551214879 0.594568094604 0.597757767539} Si9 48 1 14 {} {0.611137093556 0.620532370898 0.408437179826} Si10 49 1 7 {} {0.622332577051 0.601098272021 0.298891838856} N5 50 1 7 {} {0.694339217684 0.614428053455 0.634415331897} N6 51 1 1 {} {0.569598198085 0.364205975591 0.263777633486} H22 52 1 1 {} {0.624335430249 0.337573587297 0.290128539481} H23 53 1 1 {} {0.611326439828 0.269758521142 0.477210800364} H24 54 1 1 {} {0.505997118346 0.407445347954 0.418665800076} H25 55 1 1 {} {0.523743030014 0.396090582959 0.530809267415} H26 56 1 1 {} {0.508196667082 0.325614412768 0.465690510307} H27 57 1 1 {} {0.502882540451 0.179573919398 0.263581897156} H28 58 1 1 {} {0.50284864862 0.256851316235 0.204821894266} H29 59 1 1 {} {0.491750500445 0.255561281535 0.320999117125} H30 60 1 1 {} {0.591093982996 0.156413941855 0.383751565652} H31 61 1 1 {} {0.589554024923 0.202348885251 0.15305522735} H32 62 1 1 {} {0.672642512464 0.457085397363 0.541033190348} H33 63 1 1 {} {0.682301793438 0.485445771919 0.383661773879} H34 64 1 1 {} {0.614044546878 0.656587815019 0.604216268939} H35 65 1 1 {} {0.625189498548 0.541559297843 0.659215188784} H36 66 1 1 {} {0.561359516264 0.619891693356 0.416013710011} H37 67 1 1 {} {0.628168898227 0.689394682837 0.426273796545} H38 68 1 1 {} {0.605816343251 0.562959444965 0.268656367769} H39 69 1 1 {} {0.653817106831 0.604841659819 0.274539841854} H40 70 1 1 {} {0.715747467148 0.57714744411 0.651953586421} H41 71 1 1 {} {0.711323982181 0.653492901243 0.606993316061} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end