iterations/neb0_image03_iter25.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.352984421959 0.550224625607 0.422170366693} C1 1 1 14 {} {0.333953697078 0.517217910424 0.533259831137} Si1 2 1 14 {} {0.408177166697 0.592511301573 0.417933485386} Si2 3 1 8 {} {0.337206144158 0.577497810861 0.608517826116} O1 4 1 8 {} {0.280988886812 0.495328565739 0.525228970708} O2 5 1 6 {} {0.365558170473 0.441225765765 0.568673348787} C2 6 1 6 {} {0.457218386359 0.534937176882 0.411658119257} C3 7 1 8 {} {0.409839905431 0.636712412447 0.513181760687} O3 8 1 8 {} {0.40850068311 0.643519241672 0.330243701201} O4 9 1 14 {} {0.22871573992 0.500857070183 0.555862493959} Si3 10 1 7 {} {0.209048206798 0.422141867099 0.587318068228} N1 11 1 14 {} {0.173002373353 0.417863269954 0.679124409655} Si4 12 1 14 {} {0.224602863832 0.352148691801 0.52332534549} Si5 13 1 7 {} {0.22582288403 0.364689336039 0.409771968827} N2 14 1 7 {} {0.125501831637 0.466210486318 0.672034325897} N3 15 1 1 {} {0.352559081091 0.509776500494 0.372154312867} H1 16 1 1 {} {0.327996902952 0.587296162595 0.400183625083} H2 17 1 1 {} {0.360960071692 0.609643827617 0.595415877865} H3 18 1 1 {} {0.362228571973 0.400232105897 0.520175868712} H4 19 1 1 {} {0.3529087396 0.423154027195 0.633182869626} H5 20 1 1 {} {0.401278774025 0.452200797813 0.576915388981} H6 21 1 1 {} {0.489042151922 0.562495125573 0.410996894222} H7 22 1 1 {} {0.455796264877 0.504272497441 0.350746098663} H8 23 1 1 {} {0.45810705707 0.500814041822 0.469140708393} H9 24 1 1 {} {0.435025263833 0.66615566265 0.523374206404} H10 25 1 1 {} {0.436839412355 0.65209647287 0.30140555079} H11 26 1 1 {} {0.222923115293 0.546502563684 0.633886845627} H12 27 1 1 {} {0.203185157005 0.527422726221 0.478153108566} H13 28 1 1 {} {0.16013537168 0.346151131792 0.687337022833} H14 29 1 1 {} {0.196058339771 0.4421844737 0.761002704649} H15 30 1 1 {} {0.270528267063 0.330416857323 0.548191361536} H16 31 1 1 {} {0.191480747643 0.298714915194 0.543648565828} H17 32 1 1 {} {0.252288295123 0.388516769613 0.381764101902} H18 33 1 1 {} {0.197342520475 0.375244534534 0.375705430471} H19 34 1 1 {} {0.125315359184 0.513802153429 0.695721806712} H20 35 1 1 {} {0.102816750185 0.460203177885 0.622280147367} H21 36 1 6 {} {0.589008768261 0.332402280549 0.309704907803} C4 37 1 14 {} {0.584267078626 0.365901470158 0.426738873281} Si6 38 1 14 {} {0.573024623237 0.24334009074 0.291697139791} Si7 39 1 8 {} {0.612975474171 0.316898647827 0.494729724437} O5 40 1 8 {} {0.60683668442 0.440967993479 0.431693381145} O6 41 1 6 {} {0.525017295742 0.374489884518 0.463363802808} C5 42 1 6 {} {0.512133857701 0.232708056547 0.268168851789} C6 43 1 8 {} {0.588155298659 0.204729647337 0.386085107742} O7 44 1 8 {} {0.602698133221 0.206235855236 0.21189292837} O8 45 1 14 {} {0.650611994004 0.485806446266 0.460347877514} Si8 46 1 7 {} {0.635071816294 0.566856852359 0.487418401948} N4 47 1 14 {} {0.641535349897 0.594561517639 0.597702045769} Si9 48 1 14 {} {0.611134485289 0.620538501224 0.408394377786} Si10 49 1 7 {} {0.622309632782 0.60116602009 0.298904502003} N5 50 1 7 {} {0.694384914773 0.6144224667 0.634387573553} N6 51 1 1 {} {0.569597884248 0.364210824051 0.26378313101} H22 52 1 1 {} {0.624340335645 0.337572928612 0.290123329662} H23 53 1 1 {} {0.611329752906 0.269743504177 0.477215289902} H24 54 1 1 {} {0.505992717231 0.407448627262 0.418661705313} H25 55 1 1 {} {0.523743753865 0.396082247091 0.530806334277} H26 56 1 1 {} {0.508202212119 0.325620168293 0.465696775374} H27 57 1 1 {} {0.502881737393 0.179574613733 0.263579479293} H28 58 1 1 {} {0.502844256606 0.256854092125 0.204818251784} H29 59 1 1 {} {0.491746946187 0.255565286282 0.320998623298} H30 60 1 1 {} {0.591092509204 0.156405997818 0.383748528929} H31 61 1 1 {} {0.589553452969 0.202350398286 0.15306193905} H32 62 1 1 {} {0.672644130272 0.457072112654 0.541041395769} H33 63 1 1 {} {0.682301272596 0.48543612635 0.38367566274} H34 64 1 1 {} {0.614040987043 0.656622205502 0.60422898342} H35 65 1 1 {} {0.62518197355 0.541516256187 0.659297618884} H36 66 1 1 {} {0.561386874563 0.61988377638 0.416032139724} H37 67 1 1 {} {0.628165226337 0.689373255128 0.426299650489} H38 68 1 1 {} {0.605780569836 0.562888430796 0.26861441676} H39 69 1 1 {} {0.653866923128 0.604849150885 0.274525080915} H40 70 1 1 {} {0.715724768766 0.577195612373 0.651933329605} H41 71 1 1 {} {0.711310703935 0.653452956149 0.607028568264} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end