iterations/neb0_image03_iter6.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image03 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.352955685358 0.55025939184 0.422161683257} C1 1 1 14 {} {0.333918833585 0.517253760006 0.533234487412} Si1 2 1 14 {} {0.408188740389 0.592427658673 0.417959561109} Si2 3 1 8 {} {0.337154396966 0.577520190948 0.608482269767} O1 4 1 8 {} {0.28096042265 0.495293430975 0.525275250764} O2 5 1 6 {} {0.365549329799 0.44128601159 0.568624058676} C2 6 1 6 {} {0.457242416516 0.534825488024 0.411698477362} C3 7 1 8 {} {0.409801834062 0.636774560053 0.513077331419} O3 8 1 8 {} {0.40850253654 0.64331496954 0.330189463216} O4 9 1 14 {} {0.228682352168 0.500874212072 0.555888292311} Si3 10 1 7 {} {0.20902274894 0.422155343385 0.587319222269} N1 11 1 14 {} {0.172976639032 0.417835588575 0.679131941977} Si4 12 1 14 {} {0.224609406213 0.352151490833 0.523351455536} Si5 13 1 7 {} {0.225827724818 0.364561491433 0.40976925876} N2 14 1 7 {} {0.125462314619 0.466163611203 0.671989648563} N3 15 1 1 {} {0.35250570858 0.509825333454 0.372125920747} H1 16 1 1 {} {0.328017219349 0.587412444886 0.400163398758} H2 17 1 1 {} {0.36094598292 0.609676403151 0.595418857098} H3 18 1 1 {} {0.36222448383 0.400291511311 0.520120449173} H4 19 1 1 {} {0.3528758442 0.423228303138 0.633120869881} H5 20 1 1 {} {0.401263966703 0.452265773442 0.576902600798} H6 21 1 1 {} {0.489041411731 0.562438827198 0.41094028626} H7 22 1 1 {} {0.455826475893 0.504207089244 0.350739441145} H8 23 1 1 {} {0.458208763233 0.500654895688 0.469121109216} H9 24 1 1 {} {0.435039992895 0.666117223763 0.523357304013} H10 25 1 1 {} {0.436856929377 0.652084439556 0.30141031018} H11 26 1 1 {} {0.222882557395 0.54653141028 0.633893193738} H12 27 1 1 {} {0.203147271573 0.527434095639 0.478181297293} H13 28 1 1 {} {0.160093331057 0.346118536216 0.687307224871} H14 29 1 1 {} {0.196016726358 0.442156387463 0.761057397713} H15 30 1 1 {} {0.270532985239 0.33046484822 0.548276699953} H16 31 1 1 {} {0.191483631646 0.298738571147 0.543663177791} H17 32 1 1 {} {0.252274616537 0.388524584361 0.381821176099} H18 33 1 1 {} {0.197358197947 0.37519200311 0.375766711153} H19 34 1 1 {} {0.125279494636 0.513758839009 0.695770835263} H20 35 1 1 {} {0.10280215213 0.460203165142 0.622229126461} H21 36 1 6 {} {0.589011421982 0.332393862943 0.30971549427} C4 37 1 14 {} {0.584237484175 0.365954983057 0.426708901237} Si6 38 1 14 {} {0.573058922065 0.243320841643 0.2917608687} Si7 39 1 8 {} {0.6128862972 0.316877752499 0.49473201156} O5 40 1 8 {} {0.606865636065 0.440985560936 0.431695344605} O6 41 1 6 {} {0.524991048399 0.374624277269 0.463327973181} C5 42 1 6 {} {0.512163120928 0.232700299936 0.268164497062} C6 43 1 8 {} {0.588302772788 0.204677028568 0.386062417181} O7 44 1 8 {} {0.602756980059 0.206294701705 0.2118984682} O8 45 1 14 {} {0.650624057514 0.485832860523 0.460357491745} Si8 46 1 7 {} {0.635098444722 0.566887119732 0.487393003739} N4 47 1 14 {} {0.641462961945 0.594514433174 0.597714125046} Si9 48 1 14 {} {0.61119700729 0.620558585123 0.408239724739} Si10 49 1 7 {} {0.622202777711 0.601516429369 0.298588614976} N5 50 1 7 {} {0.694454632658 0.614325889859 0.633979978807} N6 51 1 1 {} {0.569597111826 0.364164872327 0.263758934941} H22 52 1 1 {} {0.624340993841 0.337542247657 0.29011977303} H23 53 1 1 {} {0.611313156911 0.269760445578 0.477226589648} H24 54 1 1 {} {0.505894657582 0.407592967687 0.418767237418} H25 55 1 1 {} {0.523762827718 0.396133282136 0.530819559583} H26 56 1 1 {} {0.508195767151 0.325740032891 0.465696687292} H27 57 1 1 {} {0.502833030265 0.179597367513 0.263516641718} H28 58 1 1 {} {0.50292148043 0.256873068675 0.204797962432} H29 59 1 1 {} {0.491742360059 0.255613766316 0.320902087928} H30 60 1 1 {} {0.591017895825 0.156343435078 0.383817091376} H31 61 1 1 {} {0.589572506816 0.202304941643 0.153179428924} H32 62 1 1 {} {0.672627744521 0.457040920646 0.541028435855} H33 63 1 1 {} {0.682334044486 0.48542641792 0.383721932141} H34 64 1 1 {} {0.614075823088 0.656702533743 0.604497223365} H35 65 1 1 {} {0.625226974233 0.541566221128 0.659654400862} H36 66 1 1 {} {0.561471661653 0.619706418281 0.416086559701} H37 67 1 1 {} {0.628170881414 0.689383440236 0.426564139307} H38 68 1 1 {} {0.605925796676 0.562749914797 0.268751553865} H39 69 1 1 {} {0.653969932484 0.604843725803 0.274466862814} H40 70 1 1 {} {0.715707728683 0.577203421488 0.651916631481} H41 71 1 1 {} {0.71128289988 0.65335037931 0.606917859274} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end