iterations/neb0_image04_iter11.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.3548097158 0.545420324104 0.422465079965} C1 1 1 14 {} {0.335713297874 0.5123914217 0.533460558302} Si1 2 1 14 {} {0.409963626667 0.587698563728 0.418220953808} Si2 3 1 8 {} {0.33904084415 0.57263414094 0.608728159532} O1 4 1 8 {} {0.282822340104 0.490347997222 0.525526903988} O2 5 1 6 {} {0.36740096304 0.436458464651 0.568893431206} C2 6 1 6 {} {0.458964463187 0.530247485199 0.41189403965} C3 7 1 8 {} {0.41165172407 0.631943583924 0.513371206274} O3 8 1 8 {} {0.410332778321 0.638583160223 0.330443980591} O4 9 1 14 {} {0.230494412119 0.495979621624 0.556138703456} Si3 10 1 7 {} {0.210864184721 0.417287228673 0.587590518801} N1 11 1 14 {} {0.174835850245 0.413002516012 0.679461626867} Si4 12 1 14 {} {0.226444907252 0.347256785543 0.523593551438} Si5 13 1 7 {} {0.22768382841 0.359592133905 0.409985034789} N2 14 1 7 {} {0.12730218719 0.461295451114 0.672313538463} N3 15 1 1 {} {0.354356274029 0.50500371377 0.372411433657} H1 16 1 1 {} {0.329873670887 0.582549944784 0.40043607417} H2 17 1 1 {} {0.362789833562 0.604830731302 0.595683802725} H3 18 1 1 {} {0.364067026721 0.395451422346 0.520408297649} H4 19 1 1 {} {0.354726226712 0.418385055345 0.633392316401} H5 20 1 1 {} {0.403120326635 0.447431391104 0.577167938185} H6 21 1 1 {} {0.490833371287 0.55764874832 0.411256885476} H7 22 1 1 {} {0.457588155672 0.499492732832 0.351059952695} H8 23 1 1 {} {0.459915942727 0.496136249217 0.469309113461} H9 24 1 1 {} {0.436878131956 0.661305533913 0.523600843633} H10 25 1 1 {} {0.438702381698 0.647270427453 0.301715348095} H11 26 1 1 {} {0.22474083924 0.541689900707 0.634117083436} H12 27 1 1 {} {0.20500760649 0.522609519461 0.478425754638} H13 28 1 1 {} {0.16196422048 0.341291158388 0.68759955601} H14 29 1 1 {} {0.197879444682 0.43735300165 0.76134016868} H15 30 1 1 {} {0.272375657368 0.325630192978 0.548522908754} H16 31 1 1 {} {0.193321323496 0.29389747486 0.543945646279} H17 32 1 1 {} {0.254103531125 0.383675941762 0.382108872509} H18 33 1 1 {} {0.19920623654 0.370364243202 0.37604542471} H19 34 1 1 {} {0.127138299294 0.508907520899 0.696017306733} H20 35 1 1 {} {0.1046502172 0.455363438004 0.62249427908} H21 36 1 6 {} {0.587180751536 0.337278914688 0.309429950291} C4 37 1 14 {} {0.582430185967 0.370695832125 0.426468794166} Si6 38 1 14 {} {0.571221137157 0.2482145867 0.291553432214} Si7 39 1 8 {} {0.611096177735 0.321714293506 0.49447512219} O5 40 1 8 {} {0.605011696429 0.445814330744 0.431393027705} O6 41 1 6 {} {0.523282668178 0.379201746722 0.463116042858} C5 42 1 6 {} {0.510334425702 0.237561484729 0.26792784534} C6 43 1 8 {} {0.586488803844 0.209508247678 0.385778693984} O7 44 1 8 {} {0.600899521379 0.211256904385 0.211628014074} O8 45 1 14 {} {0.648753284507 0.490631041888 0.460074964811} Si8 46 1 7 {} {0.633212833525 0.571681061853 0.487104531064} N4 47 1 14 {} {0.639774228261 0.599448854009 0.597542961604} Si9 48 1 14 {} {0.609311337121 0.625406419049 0.408318639731} Si10 49 1 7 {} {0.620437721895 0.606147415352 0.298384708953} N5 50 1 7 {} {0.692512338751 0.619228461925 0.633883516473} N6 51 1 1 {} {0.567747328521 0.369022046497 0.26346392689} H22 52 1 1 {} {0.622508892927 0.342393778278 0.289841622327} H23 53 1 1 {} {0.60947767588 0.274592402073 0.476944217581} H24 54 1 1 {} {0.504254161748 0.412054744223 0.418506657636} H25 55 1 1 {} {0.52193315026 0.400917586188 0.530459083026} H26 56 1 1 {} {0.506377785436 0.33044225522 0.465454521914} H27 57 1 1 {} {0.501002670352 0.184448903119 0.263275934247} H28 58 1 1 {} {0.501059952495 0.261695910007 0.204554959465} H29 59 1 1 {} {0.489901031598 0.260424950542 0.320671956181} H30 60 1 1 {} {0.589206205637 0.161166119888 0.383531673659} H31 61 1 1 {} {0.587719871973 0.207164090645 0.152887858643} H32 62 1 1 {} {0.670779197463 0.461904953864 0.540759514305} H33 63 1 1 {} {0.680462662676 0.490283381607 0.383433165908} H34 64 1 1 {} {0.612202689265 0.661498944179 0.604136674777} H35 65 1 1 {} {0.62336256432 0.54642365571 0.659186873272} H36 66 1 1 {} {0.559570610544 0.624610815058 0.415735345648} H37 67 1 1 {} {0.626325873746 0.694268620845 0.42615007831} H38 68 1 1 {} {0.604052151316 0.5676392514 0.268402060157} H39 69 1 1 {} {0.652071200014 0.609675365391 0.274177250669} H40 70 1 1 {} {0.713850689015 0.582039659937 0.651640798121} H41 71 1 1 {} {0.70945465408 0.658242082628 0.606645593501} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end