iterations/neb0_image04_iter13.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354805994861 0.545415834941 0.422462701812} C1 1 1 14 {} {0.335708111281 0.51236726854 0.533456303269} Si1 2 1 14 {} {0.40995377332 0.587713340789 0.418210129465} Si2 3 1 8 {} {0.339046312424 0.572643412262 0.608737020816} O1 4 1 8 {} {0.282863068919 0.49034457119 0.52551322699} O2 5 1 6 {} {0.367401328369 0.436455089603 0.568890214319} C2 6 1 6 {} {0.458978149226 0.530243137613 0.411878233748} C3 7 1 8 {} {0.41164919509 0.631952552552 0.513391006881} O3 8 1 8 {} {0.410334159493 0.638606987881 0.33043038545} O4 9 1 14 {} {0.230470422035 0.49598461789 0.556149719019} Si3 10 1 7 {} {0.210862969629 0.417277563221 0.587588585993} N1 11 1 14 {} {0.174835492614 0.412997266843 0.679454723259} Si4 12 1 14 {} {0.2264472196 0.347264413235 0.523596865874} Si5 13 1 7 {} {0.227687477746 0.359581629358 0.409984084418} N2 14 1 7 {} {0.127306854471 0.461291812225 0.672323957037} N3 15 1 1 {} {0.354359851925 0.505001868205 0.372412885661} H1 16 1 1 {} {0.329868768976 0.582548854858 0.400433919333} H2 17 1 1 {} {0.362785616383 0.604818779456 0.595683073333} H3 18 1 1 {} {0.364067971576 0.395447956812 0.520411286187} H4 19 1 1 {} {0.354728036429 0.418382049994 0.633394306349} H5 20 1 1 {} {0.403117884227 0.447428707053 0.577166612624} H6 21 1 1 {} {0.490825829746 0.557661961702 0.411255858146} H7 22 1 1 {} {0.457578038763 0.499508517898 0.3510621987} H8 23 1 1 {} {0.459898636628 0.496154817115 0.469322222598} H9 24 1 1 {} {0.436878190958 0.661307929852 0.523599497145} H10 25 1 1 {} {0.438694597229 0.647268287273 0.301726545384} H11 26 1 1 {} {0.224743149769 0.541682870016 0.634109139303} H12 27 1 1 {} {0.205009988156 0.522605298679 0.478426069431} H13 28 1 1 {} {0.161967624715 0.341290537246 0.687605277503} H14 29 1 1 {} {0.19788307966 0.43735598958 0.761343275186} H15 30 1 1 {} {0.272376902206 0.325625032463 0.548520208805} H16 31 1 1 {} {0.193316922599 0.293886406456 0.543948269471} H17 32 1 1 {} {0.254102811105 0.383671377267 0.382111295935} H18 33 1 1 {} {0.199202592945 0.370364181042 0.376040846181} H19 34 1 1 {} {0.127139906082 0.508904961988 0.696013643422} H20 35 1 1 {} {0.104650608307 0.455360452365 0.622493037518} H21 36 1 6 {} {0.587182522047 0.337285924679 0.309427604207} C4 37 1 14 {} {0.58244842023 0.370676678833 0.426466433854} Si6 38 1 14 {} {0.571216880918 0.248212975248 0.291554937903} Si7 39 1 8 {} {0.611106320859 0.321724132701 0.494474082543} O5 40 1 8 {} {0.605022193664 0.445835781956 0.43139958322} O6 41 1 6 {} {0.523285330911 0.379189459824 0.463133941932} C5 42 1 6 {} {0.510331932124 0.237563917042 0.267931751306} C6 43 1 8 {} {0.586488598252 0.209517157887 0.385778124778} O7 44 1 8 {} {0.600904175464 0.211265858574 0.211632107511} O8 45 1 14 {} {0.64874170897 0.49061207234 0.460081566786} Si8 46 1 7 {} {0.633217876707 0.571687008571 0.487150550442} N4 47 1 14 {} {0.639765284442 0.599444356635 0.597558331566} Si9 48 1 14 {} {0.609305666182 0.625412838581 0.408261946302} Si10 49 1 7 {} {0.62049480946 0.606061694942 0.298269854125} N5 50 1 7 {} {0.692409277491 0.619224551297 0.63392112747} N6 51 1 1 {} {0.567749126969 0.369024486075 0.263468549964} H22 52 1 1 {} {0.622508248792 0.342398200097 0.289839932048} H23 53 1 1 {} {0.6094803848 0.274579068759 0.476942373057} H24 54 1 1 {} {0.504258804998 0.412048616512 0.418465424407} H25 55 1 1 {} {0.521937177161 0.400911610279 0.53047339534} H26 56 1 1 {} {0.506379554848 0.330403227953 0.465465744247} H27 57 1 1 {} {0.501006908088 0.184451112482 0.263280799493} H28 58 1 1 {} {0.501057571834 0.261698423681 0.20455769819} H29 59 1 1 {} {0.489900035565 0.260425866084 0.320679221787} H30 60 1 1 {} {0.589210258009 0.16116742502 0.383525847384} H31 61 1 1 {} {0.587715221868 0.207169253689 0.152875472355} H32 62 1 1 {} {0.670776515982 0.461911523897 0.540750472308} H33 63 1 1 {} {0.680462218472 0.490285352382 0.38342324419} H34 64 1 1 {} {0.612206182175 0.66149343584 0.604119760342} H35 65 1 1 {} {0.623365889585 0.546433127901 0.659159749935} H36 66 1 1 {} {0.559562393266 0.624622388831 0.415740294671} H37 67 1 1 {} {0.626323792385 0.694268679162 0.426144424696} H38 68 1 1 {} {0.60407228599 0.567722109722 0.268461719528} H39 69 1 1 {} {0.651985797095 0.609672579331 0.27425456041} H40 70 1 1 {} {0.71390145199 0.581964350699 0.651680943324} H41 71 1 1 {} {0.709503619103 0.658344754044 0.606588109146} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end