iterations/neb0_image04_iter17.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354800314066 0.545421665981 0.422453446368} C1 1 1 14 {} {0.335734484596 0.512374448394 0.533475672652} Si1 2 1 14 {} {0.409955555857 0.587717342023 0.418206793683} Si2 3 1 8 {} {0.339030621914 0.572627832687 0.608742676276} O1 4 1 8 {} {0.282842987556 0.490342671689 0.5255184592} O2 5 1 6 {} {0.367402399955 0.436447991816 0.568891393154} C2 6 1 6 {} {0.458992807107 0.530220361951 0.411889732291} C3 7 1 8 {} {0.411637616057 0.631965216868 0.513400352315} O3 8 1 8 {} {0.410312129131 0.638623752555 0.330441071467} O4 9 1 14 {} {0.230490144711 0.495981204317 0.556138880514} Si3 10 1 7 {} {0.210859758637 0.417285401339 0.587582825478} N1 11 1 14 {} {0.174835117996 0.412988878797 0.679455410368} Si4 12 1 14 {} {0.226449790052 0.347269669881 0.523606321853} Si5 13 1 7 {} {0.227678908438 0.35958220754 0.409980693122} N2 14 1 7 {} {0.127306714113 0.461287393218 0.672312326117} N3 15 1 1 {} {0.354363971863 0.504997794472 0.372407073969} H1 16 1 1 {} {0.32985727403 0.58255299476 0.400430423992} H2 17 1 1 {} {0.362793932821 0.604823285302 0.595673947371} H3 18 1 1 {} {0.36406951156 0.395442914459 0.520409515347} H4 19 1 1 {} {0.354729691806 0.418383061298 0.633393212127} H5 20 1 1 {} {0.403112560926 0.447427834197 0.577164347719} H6 21 1 1 {} {0.490830806894 0.557687836267 0.411243122624} H7 22 1 1 {} {0.457573558059 0.499507845358 0.35103314326} H8 23 1 1 {} {0.4598892561 0.496144824964 0.469352236729} H9 24 1 1 {} {0.436882344676 0.66131498461 0.523601751952} H10 25 1 1 {} {0.438704629457 0.647272723113 0.301715420817} H11 26 1 1 {} {0.224742252209 0.541680668978 0.634112487148} H12 27 1 1 {} {0.205007561077 0.522601612493 0.478422179617} H13 28 1 1 {} {0.161967531594 0.341287624034 0.687611025286} H14 29 1 1 {} {0.197884753206 0.43735742691 0.761340435869} H15 30 1 1 {} {0.272380144554 0.325619738489 0.548521495032} H16 31 1 1 {} {0.193313596521 0.293877946338 0.54394761626} H17 32 1 1 {} {0.254105494097 0.383669991301 0.382110194872} H18 33 1 1 {} {0.19920510651 0.370361042711 0.376042269721} H19 34 1 1 {} {0.127139787728 0.508905577687 0.696012543255} H20 35 1 1 {} {0.104655800849 0.455360814242 0.622505045562} H21 36 1 6 {} {0.587185158197 0.337280524244 0.309426703845} C4 37 1 14 {} {0.582461664299 0.370686492884 0.426456737587} Si6 38 1 14 {} {0.571213032375 0.248204949148 0.291548177309} Si7 39 1 8 {} {0.611122525421 0.321692361077 0.494466304296} O5 40 1 8 {} {0.605018094844 0.445829086674 0.43140417842} O6 41 1 6 {} {0.523264595194 0.379197797316 0.463116273936} C5 42 1 6 {} {0.510326001892 0.237564898875 0.267933182452} C6 43 1 8 {} {0.586491540848 0.209514168443 0.385784934032} O7 44 1 8 {} {0.600908548681 0.211261304687 0.211605430397} O8 45 1 14 {} {0.648748661792 0.49062885605 0.460107604471} Si8 46 1 7 {} {0.633222752126 0.571712066458 0.487144687465} N4 47 1 14 {} {0.639657612947 0.599405604724 0.597538019468} Si9 48 1 14 {} {0.609331865817 0.625391276267 0.408056272855} Si10 49 1 7 {} {0.620426390543 0.606103334441 0.298442598779} N5 50 1 7 {} {0.692542406467 0.619269015776 0.633931855625} N6 51 1 1 {} {0.567751921363 0.369027240947 0.263479050989} H22 52 1 1 {} {0.6225080623 0.34240034656 0.289834123248} H23 53 1 1 {} {0.609486353393 0.274585008016 0.476955017313} H24 54 1 1 {} {0.504247310765 0.412069686273 0.418419816287} H25 55 1 1 {} {0.521942175584 0.400906517333 0.530516031694} H26 56 1 1 {} {0.506387295744 0.330371593397 0.46548482981} H27 57 1 1 {} {0.501010750626 0.184447193451 0.263283868239} H28 58 1 1 {} {0.50105706643 0.261702956344 0.204559123026} H29 59 1 1 {} {0.489897607017 0.260430104201 0.320685153601} H30 60 1 1 {} {0.589210951427 0.161180859352 0.383519615364} H31 61 1 1 {} {0.587716328171 0.207174685833 0.152894017922} H32 62 1 1 {} {0.670773287366 0.461910261669 0.540736734268} H33 63 1 1 {} {0.680463401271 0.490282429412 0.383418414219} H34 64 1 1 {} {0.612214163251 0.661499051942 0.604114128229} H35 65 1 1 {} {0.623370676627 0.546428138274 0.659181426942} H36 66 1 1 {} {0.559566769192 0.624623496048 0.415757630522} H37 67 1 1 {} {0.626318299726 0.694251061395 0.426161160819} H38 68 1 1 {} {0.604055707874 0.567695215943 0.268446390719} H39 69 1 1 {} {0.652043045034 0.609679374512 0.274228164216} H40 70 1 1 {} {0.713873084482 0.582013171657 0.651664078062} H41 71 1 1 {} {0.709477948926 0.658291629979 0.606639025827} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end