iterations/neb0_image04_iter2.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354789076343 0.545452138215 0.42242511569} C1 1 1 14 {} {0.335750587665 0.512448682131 0.533481029255} Si1 2 1 14 {} {0.410029458571 0.587569291217 0.418240613681} Si2 3 1 8 {} {0.338991586793 0.572721145274 0.608746670556} O1 4 1 8 {} {0.282832231666 0.490460630545 0.525545484589} O2 5 1 6 {} {0.367386245689 0.436483903591 0.568875701688} C2 6 1 6 {} {0.459100052171 0.529970782733 0.411964700796} C3 7 1 8 {} {0.411628024281 0.631990474344 0.513335729469} O3 8 1 8 {} {0.410350687618 0.638458015176 0.330453159287} O4 9 1 14 {} {0.230501040624 0.496073702127 0.556154517838} Si3 10 1 7 {} {0.210851394814 0.417354190841 0.587587036094} N1 11 1 14 {} {0.174815011699 0.412999246184 0.679431101492} Si4 12 1 14 {} {0.22645589828 0.347342392831 0.523651412241} Si5 13 1 7 {} {0.227674618842 0.359707734109 0.410034912255} N2 14 1 7 {} {0.127308498981 0.461333610539 0.6722506905} N3 15 1 1 {} {0.354340323607 0.505019201637 0.372391566604} H1 16 1 1 {} {0.329856313177 0.582624161477 0.40042638741} H2 17 1 1 {} {0.36277842911 0.604854273648 0.595690544981} H3 18 1 1 {} {0.36406528972 0.395485820955 0.520377443906} H4 19 1 1 {} {0.354711467921 0.418427030731 0.633379342512} H5 20 1 1 {} {0.40309821878 0.447461127684 0.57716887666} H6 21 1 1 {} {0.49088129976 0.557617750126 0.411189912985} H7 22 1 1 {} {0.457674607162 0.499379091972 0.350992557325} H8 23 1 1 {} {0.460064879814 0.495809181396 0.469394312667} H9 24 1 1 {} {0.43688543721 0.661295482818 0.523622915421} H10 25 1 1 {} {0.438692909845 0.647267054841 0.30168236365} H11 26 1 1 {} {0.224712717164 0.541719121783 0.634168712903} H12 27 1 1 {} {0.204976375197 0.522617878626 0.478457321035} H13 28 1 1 {} {0.16192336973 0.341303104275 0.687564691526} H14 29 1 1 {} {0.197850711113 0.437337690247 0.761332488264} H15 30 1 1 {} {0.272381769668 0.325653494785 0.548560852115} H16 31 1 1 {} {0.193321909222 0.293924449869 0.543925957634} H17 32 1 1 {} {0.254107664604 0.38371016973 0.382095522048} H18 33 1 1 {} {0.199199394618 0.370374129684 0.376028338189} H19 34 1 1 {} {0.127110521077 0.508919884305 0.696032003096} H20 35 1 1 {} {0.104634933203 0.455398931349 0.622486554571} H21 36 1 6 {} {0.587173095896 0.337207105449 0.309440050464} C4 37 1 14 {} {0.582395941157 0.370773678475 0.426422243203} Si6 38 1 14 {} {0.571221966653 0.248119991737 0.291530713874} Si7 39 1 8 {} {0.611022950078 0.321703025703 0.494447346059} O5 40 1 8 {} {0.605044754014 0.445813290632 0.431446327874} O6 41 1 6 {} {0.523141112902 0.379474041459 0.463053049105} C5 42 1 6 {} {0.510319906896 0.237516309697 0.267891401364} C6 43 1 8 {} {0.586503683188 0.209489006816 0.385802715858} O7 44 1 8 {} {0.60093965037 0.211124811131 0.211642629474} O8 45 1 14 {} {0.648774009393 0.490659123123 0.460099637839} Si8 46 1 7 {} {0.633278153317 0.571741333856 0.487165736251} N4 47 1 14 {} {0.63953293534 0.599291362358 0.59748111949} Si9 48 1 14 {} {0.609392792831 0.625396061928 0.407704968436} Si10 49 1 7 {} {0.620384741449 0.606351197457 0.298109784341} N5 50 1 7 {} {0.692548380216 0.619102641012 0.63363337579} N6 51 1 1 {} {0.567757378176 0.368975084561 0.263497380349} H22 52 1 1 {} {0.622500309697 0.342352646275 0.289850435801} H23 53 1 1 {} {0.609471623913 0.274563047926 0.476964272376} H24 54 1 1 {} {0.504026732121 0.412448517112 0.418499804679} H25 55 1 1 {} {0.521926029521 0.40095548781 0.530572333762} H26 56 1 1 {} {0.506353898065 0.330566346466 0.465437614597} H27 57 1 1 {} {0.500982990951 0.184412854201 0.263234631541} H28 58 1 1 {} {0.501089279728 0.261698723457 0.204515071874} H29 59 1 1 {} {0.489897333773 0.260444946252 0.320618325908} H30 60 1 1 {} {0.589160369954 0.161142480706 0.38355601403} H31 61 1 1 {} {0.587730738442 0.207112820463 0.152921938592} H32 62 1 1 {} {0.670779906319 0.461845922637 0.540741880636} H33 63 1 1 {} {0.680506564647 0.490231700936 0.38345346249} H34 64 1 1 {} {0.612254649618 0.661548219968 0.604280185171} H35 65 1 1 {} {0.623400097812 0.54637545314 0.659507215913} H36 66 1 1 {} {0.559658316278 0.624481280482 0.415870233402} H37 67 1 1 {} {0.626323019661 0.694171228767 0.426393416769} H38 68 1 1 {} {0.604128364359 0.567605259363 0.268594785682} H39 69 1 1 {} {0.652066244381 0.609662217086 0.274300899281} H40 70 1 1 {} {0.713916203742 0.581948786967 0.651688556844} H41 71 1 1 {} {0.709494887221 0.658255352248 0.606570209633} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end