iterations/neb0_image04_iter20.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354800857933 0.545406727933 0.422461021388} C1 1 1 14 {} {0.335739199788 0.512320068451 0.533483852601} Si1 2 1 14 {} {0.409907221713 0.587818688969 0.418179895897} Si2 3 1 8 {} {0.339048835668 0.572569130955 0.608749496334} O1 4 1 8 {} {0.282858565334 0.490267194385 0.525499091407} O2 5 1 6 {} {0.367413460788 0.436416187298 0.568900322818} C2 6 1 6 {} {0.458943472464 0.530356750189 0.411844961976} C3 7 1 8 {} {0.411633312078 0.631968300839 0.513457230302} O3 8 1 8 {} {0.410276348287 0.638758204293 0.330428988811} O4 9 1 14 {} {0.230487753539 0.495923409126 0.556125446932} Si3 10 1 7 {} {0.210861286618 0.417245143774 0.587574039067} N1 11 1 14 {} {0.174847699753 0.412973735339 0.679467592531} Si4 12 1 14 {} {0.226447755064 0.347231362805 0.523587453862} Si5 13 1 7 {} {0.22767958558 0.359500097459 0.409946123749} N2 14 1 7 {} {0.12730993736 0.461255133778 0.672350609539} N3 15 1 1 {} {0.354384402739 0.504980410261 0.372412437758} H1 16 1 1 {} {0.329844023797 0.58251119933 0.400428999989} H2 17 1 1 {} {0.36280407522 0.604795220149 0.595657818494} H3 18 1 1 {} {0.364074100522 0.395409300064 0.520428898056} H4 19 1 1 {} {0.35474335076 0.418354979602 0.633402648153} H5 20 1 1 {} {0.403116804687 0.447404837275 0.57715916376} H6 21 1 1 {} {0.490800516643 0.557761997493 0.411263357732} H7 22 1 1 {} {0.45750201236 0.499595162723 0.35103296933} H8 23 1 1 {} {0.459763159758 0.49635229425 0.469361310055} H9 24 1 1 {} {0.436881928827 0.661332727776 0.523589700611} H10 25 1 1 {} {0.438709031429 0.647277552282 0.301738880499} H11 26 1 1 {} {0.224760959379 0.541650931721 0.634076533575} H12 27 1 1 {} {0.205026001143 0.522585499492 0.478397203926} H13 28 1 1 {} {0.161996479759 0.341273652456 0.687648668942} H14 29 1 1 {} {0.197909093268 0.437372184008 0.761343170467} H15 30 1 1 {} {0.272382951679 0.325591010258 0.548496758099} H16 31 1 1 {} {0.193304241413 0.293836939143 0.543961394752} H17 32 1 1 {} {0.254104390222 0.383639709956 0.382121141707} H18 33 1 1 {} {0.199207119827 0.370350665395 0.376047662479} H19 34 1 1 {} {0.127158879659 0.508893637365 0.695996476168} H20 35 1 1 {} {0.10467198754 0.45533521728 0.622522998236} H21 36 1 6 {} {0.587196206917 0.337323068934 0.309416266716} C4 37 1 14 {} {0.582519331859 0.370626901844 0.426473339075} Si6 38 1 14 {} {0.571203886231 0.248248965608 0.291552692243} Si7 39 1 8 {} {0.611205212515 0.321673320274 0.494470252904} O5 40 1 8 {} {0.605004838429 0.445845869998 0.431387687865} O6 41 1 6 {} {0.523324488815 0.379027283812 0.463151802097} C5 42 1 6 {} {0.510323227057 0.237596813428 0.267962621129} C6 43 1 8 {} {0.586486022468 0.209536816225 0.385777596416} O7 44 1 8 {} {0.600896925089 0.211348305355 0.211572668685} O8 45 1 14 {} {0.648733141158 0.490619693026 0.460134611914} Si8 46 1 7 {} {0.633193748168 0.571719479623 0.487134557144} N4 47 1 14 {} {0.63966487191 0.599453437727 0.597574739089} Si9 48 1 14 {} {0.609308189344 0.625383494299 0.408119598421} Si10 49 1 7 {} {0.620448015674 0.605932486774 0.298670376141} N5 50 1 7 {} {0.692554123936 0.619389643148 0.634137578259} N6 51 1 1 {} {0.567751964851 0.369064170146 0.263480352838} H22 52 1 1 {} {0.622513145184 0.342433966419 0.289816102147} H23 53 1 1 {} {0.609502789418 0.274586446174 0.47695705436} H24 54 1 1 {} {0.504376003649 0.411848502902 0.418309726202} H25 55 1 1 {} {0.521958600742 0.400865118267 0.530519178721} H26 56 1 1 {} {0.506418234491 0.330205711742 0.465537945802} H27 57 1 1 {} {0.501033600015 0.184465912391 0.263319930384} H28 58 1 1 {} {0.501035128824 0.261711346735 0.204589366517} H29 59 1 1 {} {0.48989484835 0.260425434741 0.320736083072} H30 60 1 1 {} {0.589245509334 0.161213530284 0.383487916347} H31 61 1 1 {} {0.587703587715 0.207220223091 0.152877095124} H32 62 1 1 {} {0.670765628019 0.461950696618 0.540719537282} H33 63 1 1 {} {0.680436501102 0.490312538188 0.383389620362} H34 64 1 1 {} {0.612194949403 0.661477110884 0.604000032511} H35 65 1 1 {} {0.623356079867 0.546454054665 0.658996852177} H36 66 1 1 {} {0.559514163271 0.624717953691 0.415705561609} H37 67 1 1 {} {0.626309013591 0.69428029003 0.426027810946} H38 68 1 1 {} {0.604003931312 0.567770134786 0.26837465458} H39 69 1 1 {} {0.652014789402 0.60969471967 0.274217920845} H40 70 1 1 {} {0.713858249287 0.582046020425 0.651660395774} H41 71 1 1 {} {0.709482229511 0.658341625024 0.606682455247} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end