iterations/neb0_image04_iter3.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354807558765 0.545456793881 0.422426493413} C1 1 1 14 {} {0.335705479557 0.512424686156 0.533478951674} Si1 2 1 14 {} {0.410005828095 0.587581432315 0.418260123738} Si2 3 1 8 {} {0.339003886562 0.572704838202 0.608739658892} O1 4 1 8 {} {0.282870376042 0.490453977983 0.525534975966} O2 5 1 6 {} {0.367396447371 0.436479915798 0.568883810331} C2 6 1 6 {} {0.45906632627 0.530032932997 0.411977070762} C3 7 1 8 {} {0.4116382975 0.631976209463 0.513325175147} O3 8 1 8 {} {0.410350566923 0.638478193613 0.330448316485} O4 9 1 14 {} {0.230478723383 0.496020512238 0.5561737722} Si3 10 1 7 {} {0.210857716802 0.417355588927 0.587587982724} N1 11 1 14 {} {0.174818727852 0.413017836945 0.679414619239} Si4 12 1 14 {} {0.226442733902 0.347341854765 0.523628220109} Si5 13 1 7 {} {0.227677514805 0.359680641633 0.410034818732} N2 14 1 7 {} {0.12730892431 0.461322746477 0.672269306179} N3 15 1 1 {} {0.354340935316 0.505014425567 0.372393662503} H1 16 1 1 {} {0.329860434547 0.582610040013 0.400429744599} H2 17 1 1 {} {0.362780888045 0.604854516237 0.595692463307} H3 18 1 1 {} {0.364064284329 0.395479705344 0.520380903236} H4 19 1 1 {} {0.354712907166 0.4184210044 0.633379555345} H5 20 1 1 {} {0.403101455798 0.447454757358 0.57716928443} H6 21 1 1 {} {0.490877411645 0.557619418224 0.411203388017} H7 22 1 1 {} {0.457661374184 0.49938743634 0.350990405517} H8 23 1 1 {} {0.46004197597 0.495870408509 0.469365197072} H9 24 1 1 {} {0.436882310174 0.66129635713 0.52362077901} H10 25 1 1 {} {0.438696052799 0.647269473943 0.301683786519} H11 26 1 1 {} {0.224718175815 0.541720568333 0.634162781075} H12 27 1 1 {} {0.204981402907 0.522622100866 0.478446262112} H13 28 1 1 {} {0.161929582386 0.341294411215 0.687572195514} H14 29 1 1 {} {0.197854640064 0.437339688814 0.761339338189} H15 30 1 1 {} {0.272384997062 0.325646373273 0.548554289695} H16 31 1 1 {} {0.193324338087 0.293921027041 0.543930325423} H17 32 1 1 {} {0.254106969199 0.383707251322 0.382096963022} H18 33 1 1 {} {0.199202202193 0.370373034421 0.376034764812} H19 34 1 1 {} {0.127115733236 0.508917738689 0.696029308088} H20 35 1 1 {} {0.104637641024 0.455393018689 0.62248661803} H21 36 1 6 {} {0.587179674797 0.337232275918 0.309440162038} C4 37 1 14 {} {0.582375326514 0.37070484895 0.426452384541} Si6 38 1 14 {} {0.571221690005 0.248122729499 0.291531546481} Si7 39 1 8 {} {0.611031869647 0.321711453679 0.494441434697} O5 40 1 8 {} {0.605053492061 0.445864836585 0.431426297111} O6 41 1 6 {} {0.523165823246 0.379433482082 0.462999169885} C5 42 1 6 {} {0.51032622229 0.237534742639 0.267897046086} C6 43 1 8 {} {0.586500898084 0.209492654894 0.385795265958} O7 44 1 8 {} {0.600929861914 0.21115290892 0.211651772042} O8 45 1 14 {} {0.648786471244 0.490617839186 0.460167391561} Si8 46 1 7 {} {0.633204087511 0.571739350524 0.486802357634} N4 47 1 14 {} {0.63975071686 0.599423566676 0.59771757105} Si9 48 1 14 {} {0.609346392505 0.625415743043 0.408253425415} Si10 49 1 7 {} {0.620429817526 0.606276203762 0.297989911274} N5 50 1 7 {} {0.692454077092 0.619090155146 0.633637557367} N6 51 1 1 {} {0.567753943642 0.368982447518 0.263487169332} H22 52 1 1 {} {0.622500259418 0.342357040621 0.289848876219} H23 53 1 1 {} {0.609471359398 0.274575886875 0.476960477675} H24 54 1 1 {} {0.504077959625 0.412357268487 0.418540759535} H25 55 1 1 {} {0.521924459179 0.400957837743 0.530571110809} H26 56 1 1 {} {0.506359745487 0.330559470193 0.465438250852} H27 57 1 1 {} {0.500984338903 0.184413317992 0.26324058669} H28 58 1 1 {} {0.50108435634 0.261695679363 0.20452437665} H29 59 1 1 {} {0.489898513779 0.260439486544 0.320624772049} H30 60 1 1 {} {0.589167807048 0.161147319345 0.383553057595} H31 61 1 1 {} {0.58772867611 0.207120346436 0.152912858497} H32 62 1 1 {} {0.670774975159 0.461859034911 0.54072044454} H33 63 1 1 {} {0.680495885286 0.490248029914 0.383439890868} H34 64 1 1 {} {0.612229264375 0.661546277644 0.60424530209} H35 65 1 1 {} {0.623378811764 0.546363741546 0.659454200145} H36 66 1 1 {} {0.55966201654 0.624498611567 0.415823247703} H37 67 1 1 {} {0.626323610912 0.694174401568 0.426318340466} H38 68 1 1 {} {0.604099056051 0.567591110642 0.268529042406} H39 69 1 1 {} {0.652086874501 0.60967348647 0.274255510026} H40 70 1 1 {} {0.713890966621 0.581991251662 0.65165617142} H41 71 1 1 {} {0.709477846356 0.658220573742 0.606593253299} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end