iterations/neb0_image04_iter5.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354804180712 0.545453969083 0.422428733618} C1 1 1 14 {} {0.335716200885 0.512429968261 0.533479089663} Si1 2 1 14 {} {0.410008784168 0.587585214477 0.418254501516} Si2 3 1 8 {} {0.339002993904 0.572702520125 0.608739598754} O1 4 1 8 {} {0.282855077048 0.490448834775 0.525537985161} O2 5 1 6 {} {0.367394601837 0.436479592672 0.568883026463} C2 6 1 6 {} {0.459065756991 0.530033901105 0.411970519893} C3 7 1 8 {} {0.411637159513 0.631976386214 0.513328598455} O3 8 1 8 {} {0.410348982806 0.638478716281 0.330450559387} O4 9 1 14 {} {0.230486843847 0.496028073277 0.556166429872} Si3 10 1 7 {} {0.210856927922 0.417351890291 0.587588044362} N1 11 1 14 {} {0.174819085288 0.413013460931 0.679421529099} Si4 12 1 14 {} {0.226445387519 0.347336044369 0.523630579437} Si5 13 1 7 {} {0.227676870799 0.359681480976 0.410031542883} N2 14 1 7 {} {0.127307902616 0.461323497063 0.672267173909} N3 15 1 1 {} {0.354341511617 0.505014847505 0.372394178181} H1 16 1 1 {} {0.329860760358 0.582609231876 0.400429623294} H2 17 1 1 {} {0.362781489782 0.604854149237 0.595691448905} H3 18 1 1 {} {0.364064596301 0.395479412042 0.520381672548} H4 19 1 1 {} {0.354713318226 0.418420228206 0.633380117428} H5 20 1 1 {} {0.403102193949 0.447454813415 0.577169225121} H6 21 1 1 {} {0.490876133832 0.557620051303 0.411204002816} H7 22 1 1 {} {0.457660272764 0.499391068157 0.35099486929} H8 23 1 1 {} {0.460040085598 0.495872975691 0.469366838379} H9 24 1 1 {} {0.436882753458 0.661296665288 0.523620112321} H10 25 1 1 {} {0.438696753841 0.647269320622 0.301684233494} H11 26 1 1 {} {0.224718304033 0.541718957775 0.634161822289} H12 27 1 1 {} {0.204981835158 0.522620798079 0.478447116577} H13 28 1 1 {} {0.161930228917 0.34129602247 0.687571945723} H14 29 1 1 {} {0.197855091518 0.437339865373 0.761337704102} H15 30 1 1 {} {0.272383652446 0.325647183409 0.548553854841} H16 31 1 1 {} {0.193324004245 0.29392110662 0.543930188184} H17 32 1 1 {} {0.254106972642 0.383706246723 0.382097239334} H18 33 1 1 {} {0.199202307444 0.370372640304 0.376034647604} H19 34 1 1 {} {0.127115967639 0.508917741656 0.696029401166} H20 35 1 1 {} {0.104637987399 0.455392626551 0.62248749126} H21 36 1 6 {} {0.587178241957 0.337229399433 0.309439711815} C4 37 1 14 {} {0.582381655426 0.370720732511 0.426447201782} Si6 38 1 14 {} {0.571222021423 0.248128056645 0.291532541013} Si7 39 1 8 {} {0.611033443538 0.321708441764 0.494444842494} O5 40 1 8 {} {0.605047830502 0.445848651802 0.431427586446} O6 41 1 6 {} {0.523167778716 0.379428139785 0.463016478425} C5 42 1 6 {} {0.510325603437 0.237532368852 0.267897532387} C6 43 1 8 {} {0.586500765885 0.209492015066 0.385795917075} O7 44 1 8 {} {0.600929520846 0.211152891209 0.211647331235} O8 45 1 14 {} {0.648783064474 0.490628869485 0.460147203355} Si8 46 1 7 {} {0.633219196566 0.571735634324 0.486891625952} N4 47 1 14 {} {0.639707477374 0.59939827929 0.597656256844} Si9 48 1 14 {} {0.609354021932 0.625409952933 0.408148152446} Si10 49 1 7 {} {0.62041453971 0.606292379662 0.298054702775} N5 50 1 7 {} {0.692489660985 0.619103048979 0.633649589086} N6 51 1 1 {} {0.567754086499 0.36898327133 0.263487481058} H22 52 1 1 {} {0.622500907519 0.342358110907 0.289848806632} H23 53 1 1 {} {0.609471651199 0.274575713467 0.47696059394} H24 54 1 1 {} {0.504078037059 0.412357661255 0.418533124213} H25 55 1 1 {} {0.521925038347 0.400955188273 0.530563132585} H26 56 1 1 {} {0.506359620622 0.33055657267 0.465438341066} H27 57 1 1 {} {0.500984908336 0.18441532852 0.263241222785} H28 58 1 1 {} {0.501084012643 0.261696159177 0.20452416031} H29 59 1 1 {} {0.489898485176 0.260439655156 0.320625880791} H30 60 1 1 {} {0.589168368114 0.161147632273 0.383552765883} H31 61 1 1 {} {0.587729039548 0.207121209489 0.152914772286} H32 62 1 1 {} {0.670776463169 0.461858689883 0.540728072921} H33 63 1 1 {} {0.680495988681 0.490246726919 0.383443128155} H34 64 1 1 {} {0.612232480108 0.661544067535 0.604246709017} H35 65 1 1 {} {0.623381788423 0.546368960255 0.659450237353} H36 66 1 1 {} {0.559656192896 0.62450125245 0.415826845126} H37 67 1 1 {} {0.626323798731 0.694179761122 0.426323408062} H38 68 1 1 {} {0.604099760295 0.567588630086 0.268527895071} H39 69 1 1 {} {0.65209113276 0.609671608184 0.274251528095} H40 70 1 1 {} {0.713887963188 0.581993899737 0.651657437222} H41 71 1 1 {} {0.709474444793 0.658217866984 0.606598443476} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end