iterations/neb0_image04_iter6.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354798734121 0.54544129951 0.422442164355} C1 1 1 14 {} {0.335742690943 0.512440694881 0.533477642909} Si1 2 1 14 {} {0.410007275151 0.587615865216 0.418236872054} Si2 3 1 8 {} {0.339007540437 0.572678276271 0.608734453673} O1 4 1 8 {} {0.282798996675 0.490415098503 0.525546457159} O2 5 1 6 {} {0.367391723449 0.436474830215 0.56888431624} C2 6 1 6 {} {0.459038466764 0.53008473831 0.41194170701} C3 7 1 8 {} {0.411638417114 0.631967253683 0.513340837551} O3 8 1 8 {} {0.410340419456 0.638497391487 0.330458819956} O4 9 1 14 {} {0.230514625675 0.496031058416 0.556140068466} Si3 10 1 7 {} {0.210857162704 0.417331610619 0.587589055557} N1 11 1 14 {} {0.174823795281 0.41300259681 0.679447480945} Si4 12 1 14 {} {0.226450585921 0.347303824672 0.523626805648} Si5 13 1 7 {} {0.227675745984 0.359665695393 0.410012888575} N2 14 1 7 {} {0.127302623394 0.461319642557 0.672269655264} N3 15 1 1 {} {0.354345295598 0.505013709798 0.372398768672} H1 16 1 1 {} {0.329865521559 0.582594227717 0.400431367649} H2 17 1 1 {} {0.362786324695 0.604851618641 0.595687279954} H3 18 1 1 {} {0.364065615118 0.395473203852 0.520388711578} H4 19 1 1 {} {0.354716729531 0.418411330679 0.633383489428} H5 20 1 1 {} {0.403108747519 0.447450372031 0.577169200645} H6 21 1 1 {} {0.490865712154 0.55762517164 0.411217451836} H7 22 1 1 {} {0.457643962831 0.499418390186 0.351018931437} H8 23 1 1 {} {0.460012000186 0.495933142127 0.469355118931} H9 24 1 1 {} {0.436882897461 0.661299131203 0.523614760332} H10 25 1 1 {} {0.438702484261 0.647270114789 0.301688398219} H11 26 1 1 {} {0.224723196486 0.541710777025 0.634151593597} H12 27 1 1 {} {0.204988178473 0.52261652291 0.478443798678} H13 28 1 1 {} {0.161938608874 0.341298708656 0.687576243821} H14 29 1 1 {} {0.197860589072 0.437342434369 0.761333827765} H15 30 1 1 {} {0.272378483415 0.325646262298 0.548546343116} H16 31 1 1 {} {0.193323758339 0.293918607875 0.543932814403} H17 32 1 1 {} {0.254106321431 0.383698282647 0.382100114442} H18 33 1 1 {} {0.199204823846 0.370369658494 0.376038591113} H19 34 1 1 {} {0.127121199176 0.508915981418 0.696027719218} H20 35 1 1 {} {0.104641948382 0.45538596951 0.62249236397} H21 36 1 6 {} {0.587175087505 0.337232099571 0.309437226951} C4 37 1 14 {} {0.582402777111 0.370758767074 0.426440136049} Si6 38 1 14 {} {0.571223507996 0.248159631916 0.291538688205} Si7 39 1 8 {} {0.611049162986 0.321698570342 0.494459702906} O5 40 1 8 {} {0.605022812371 0.445796281235 0.431420022932} O6 41 1 6 {} {0.523197312748 0.379367720742 0.46307604075} C5 42 1 6 {} {0.510326734619 0.2375325929 0.26790459185} C6 43 1 8 {} {0.586497975169 0.209491608209 0.385794038239} O7 44 1 8 {} {0.600920627677 0.211173886998 0.211629512612} O8 45 1 14 {} {0.648772557383 0.490658783143 0.46008412051} Si8 46 1 7 {} {0.633249105227 0.571713002717 0.487125807054} N4 47 1 14 {} {0.639627775709 0.599356306886 0.597488159171} Si9 48 1 14 {} {0.609361157104 0.625391837124 0.407964343145} Si10 49 1 7 {} {0.620365642383 0.606323755263 0.298324876401} N5 50 1 7 {} {0.692614304349 0.619165865412 0.633722627615} N6 51 1 1 {} {0.56775240443 0.368993328752 0.263481821491} H22 52 1 1 {} {0.622504555573 0.34236747034 0.289847207642} H23 53 1 1 {} {0.60947318679 0.274583363418 0.4769582558} H24 54 1 1 {} {0.504116177649 0.412292717933 0.418518550091} H25 55 1 1 {} {0.521927284196 0.400941640677 0.530517186292} H26 56 1 1 {} {0.506363230625 0.330533852587 0.465439587541} H27 57 1 1 {} {0.500989276989 0.1844271872 0.263249359094} H28 58 1 1 {} {0.50107836999 0.261696681904 0.204529833741} H29 59 1 1 {} {0.489899159136 0.260436581179 0.320637103304} H30 60 1 1 {} {0.589177151032 0.161152832897 0.383548787222} H31 61 1 1 {} {0.587729375281 0.207131722104 0.152918181888} H32 62 1 1 {} {0.670781130684 0.461866693241 0.540755014659} H33 63 1 1 {} {0.680488659669 0.490251519955 0.383450903694} H34 64 1 1 {} {0.612231715325 0.661529648137 0.60422750614} H35 65 1 1 {} {0.623382682437 0.546389777502 0.659386509364} H36 66 1 1 {} {0.55962575302 0.624529445672 0.415811905048} H37 67 1 1 {} {0.62632530713 0.694212624779 0.426295359605} H38 68 1 1 {} {0.604082870701 0.567567956504 0.268474597277} H39 69 1 1 {} {0.652126573326 0.609669143588 0.274198645362} H40 70 1 1 {} {0.713854583149 0.58203662763 0.651642116323} H41 71 1 1 {} {0.709444779989 0.658181310036 0.60664186888} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end