iterations/neb0_image04_iter9.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image04 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.354805582533 0.545430877571 0.422456487209} C1 1 1 14 {} {0.335732443315 0.512425324483 0.533470987074} Si1 2 1 14 {} {0.409987498858 0.587657684015 0.418231056365} Si2 3 1 8 {} {0.339022988845 0.572647159758 0.608727062616} O1 4 1 8 {} {0.282788395819 0.490376785279 0.525542601179} O2 5 1 6 {} {0.367396420327 0.436466606398 0.568890851982} C2 6 1 6 {} {0.458990529695 0.53017891294 0.411920277127} C3 7 1 8 {} {0.411646330103 0.631950188078 0.513350528832} O3 8 1 8 {} {0.41033371915 0.638536433491 0.330457932878} O4 9 1 14 {} {0.230517257807 0.496000982231 0.556131832416} Si3 10 1 7 {} {0.210861402872 0.417310028963 0.587590514277} N1 11 1 14 {} {0.174830920794 0.413003451516 0.679460469263} Si4 12 1 14 {} {0.226447094184 0.347272264383 0.523607236888} Si5 13 1 7 {} {0.227678024011 0.359628554748 0.409996219899} N2 14 1 7 {} {0.127299870595 0.461307354312 0.672288786786} N3 15 1 1 {} {0.35435028817 0.505008735202 0.37240521788} H1 16 1 1 {} {0.329871984473 0.582569348944 0.400434858697} H2 17 1 1 {} {0.362790961395 0.604845440892 0.595684850955} H3 18 1 1 {} {0.364066138677 0.395462003082 0.520398702027} H4 19 1 1 {} {0.354721526626 0.418397507936 0.633387703581} H5 20 1 1 {} {0.403116430809 0.447440706825 0.577168971104} H6 21 1 1 {} {0.490850537942 0.557634044532 0.411240086904} H7 22 1 1 {} {0.45761610579 0.499454694306 0.351041220778} H8 23 1 1 {} {0.459963938725 0.496041180222 0.469324676255} H9 24 1 1 {} {0.436880516431 0.661302200062 0.523607372258} H10 25 1 1 {} {0.438706899129 0.647271517521 0.301698043917} H11 26 1 1 {} {0.224732251657 0.541701545817 0.634135358346} H12 27 1 1 {} {0.204998238535 0.522613963041 0.478433325135} H13 28 1 1 {} {0.161951900968 0.341294973873 0.687587186477} H14 29 1 1 {} {0.197869911316 0.437347235591 0.761335532302} H15 30 1 1 {} {0.272376091348 0.325639356663 0.548534080222} H16 31 1 1 {} {0.193324111577 0.293911145537 0.543938932689} H17 32 1 1 {} {0.254105212872 0.383687293066 0.382104039024} H18 33 1 1 {} {0.199207532907 0.370366302153 0.376044757331} H19 34 1 1 {} {0.127130317753 0.508912383123 0.696023427255} H20 35 1 1 {} {0.104646926631 0.455374364881 0.622495010747} H21 36 1 6 {} {0.58717723744 0.337254798801 0.30943395201} C4 37 1 14 {} {0.58241255756 0.370736429933 0.42645566382} Si6 38 1 14 {} {0.571223922398 0.248192703304 0.291546323397} Si7 39 1 8 {} {0.611072655513 0.321700401863 0.494469528879} O5 40 1 8 {} {0.60500984723 0.445792084237 0.431401978315} O6 41 1 6 {} {0.523244506991 0.379277255181 0.463094652754} C5 42 1 6 {} {0.510331835145 0.237547436027 0.267916340525} C6 43 1 8 {} {0.586492949498 0.209496617106 0.385786096968} O7 44 1 8 {} {0.600906472635 0.211217079476 0.211623874855} O8 45 1 14 {} {0.648766450658 0.49065488496 0.460071834426} Si8 46 1 7 {} {0.633229859492 0.571692114409 0.487114998726} N4 47 1 14 {} {0.639699474196 0.599403367144 0.597495963055} Si9 48 1 14 {} {0.609338004001 0.625394266913 0.40815562288} Si10 49 1 7 {} {0.620372774039 0.606268804042 0.298439716542} N5 50 1 7 {} {0.692620777077 0.619209853173 0.633801721939} N6 51 1 1 {} {0.567748841514 0.369008981065 0.263470035897} H22 52 1 1 {} {0.622507502953 0.342380890318 0.289844506642} H23 53 1 1 {} {0.609474887166 0.274595187844 0.476951808925} H24 54 1 1 {} {0.504192511086 0.41216042504 0.418526268615} H25 55 1 1 {} {0.521929201852 0.400929666872 0.530477345404} H26 56 1 1 {} {0.506371066784 0.330496901826 0.465443935287} H27 57 1 1 {} {0.500995353706 0.184438984497 0.263262678271} H28 58 1 1 {} {0.50106879696 0.26169542496 0.204542978605} H29 59 1 1 {} {0.489900561921 0.260429739055 0.320654321359} H30 60 1 1 {} {0.58919210822 0.161160709436 0.383541298362} H31 61 1 1 {} {0.587726302887 0.207148402915 0.152908287983} H32 62 1 1 {} {0.670781455575 0.461885503883 0.540763025226} H33 63 1 1 {} {0.680474045891 0.49026838223 0.383445888563} H34 64 1 1 {} {0.612214676946 0.661514036075 0.604182993042} H35 65 1 1 {} {0.62337056596 0.546405969752 0.659283913337} H36 66 1 1 {} {0.559596549989 0.624571553925 0.415767420976} H37 67 1 1 {} {0.626326405738 0.694245420342 0.426216568415} H38 68 1 1 {} {0.604055276623 0.567568555316 0.268403925207} H39 69 1 1 {} {0.652138931269 0.609673773452 0.274147684962} H40 70 1 1 {} {0.713826190924 0.582076887258 0.651621873803} H41 71 1 1 {} {0.709425109949 0.658164286725 0.606675080199} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end