iterations/neb0_image05_iter13.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image05 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.356647580683 0.54055247689 0.422735242812} C1 1 1 14 {} {0.337568450575 0.507497490978 0.533749264461} Si1 2 1 14 {} {0.41166921122 0.583129427777 0.418387483667} Si2 3 1 8 {} {0.340892315577 0.567803296042 0.608996265094} O1 4 1 8 {} {0.284697532854 0.485606013691 0.525797366736} O2 5 1 6 {} {0.369269293313 0.431561966402 0.569163499887} C2 6 1 6 {} {0.460652176751 0.525856306851 0.412040586918} C3 7 1 8 {} {0.413497006284 0.627071109001 0.513733676217} O3 8 1 8 {} {0.412124997901 0.633802132148 0.330483461318} O4 9 1 14 {} {0.232296481328 0.491160027146 0.556421730004} Si3 10 1 7 {} {0.212737835795 0.412412943389 0.587882594396} N1 11 1 14 {} {0.176702386902 0.408115467071 0.679740200296} Si4 12 1 14 {} {0.228336587099 0.342418354816 0.523873783741} Si5 13 1 7 {} {0.229538272691 0.354883461035 0.410308361359} N2 14 1 7 {} {0.129188035838 0.456459724064 0.672577220989} N3 15 1 1 {} {0.356231730746 0.500122644218 0.372694985455} H1 16 1 1 {} {0.331700134626 0.577652047862 0.400712264162} H2 17 1 1 {} {0.364649957229 0.599938846523 0.595955955647} H3 18 1 1 {} {0.365939276737 0.390554336796 0.520682332209} H4 19 1 1 {} {0.356597334714 0.413490300394 0.633668566648} H5 20 1 1 {} {0.404985374693 0.442529157044 0.577438747588} H6 21 1 1 {} {0.492638905942 0.552834082535 0.411576115644} H7 22 1 1 {} {0.459323036935 0.494889834388 0.351478896954} H8 23 1 1 {} {0.461499644526 0.491862889352 0.469471133602} H9 24 1 1 {} {0.438741573495 0.656414640161 0.523868585401} H10 25 1 1 {} {0.440568330848 0.642411255793 0.302013630136} H11 26 1 1 {} {0.226595579971 0.536811535153 0.634417611008} H12 27 1 1 {} {0.206849313483 0.517731871814 0.47866750332} H13 28 1 1 {} {0.163823298537 0.336401989344 0.687883772445} H14 29 1 1 {} {0.199754947029 0.432462693611 0.761628311491} H15 30 1 1 {} {0.274253952846 0.3207309245 0.548793398925} H16 31 1 1 {} {0.19520443032 0.289018702609 0.544208442588} H17 32 1 1 {} {0.255988683529 0.378804734923 0.382351880699} H18 33 1 1 {} {0.201051142316 0.365491752358 0.376292456382} H19 34 1 1 {} {0.129007504583 0.504055605691 0.696300015328} H20 35 1 1 {} {0.106519849131 0.450466953321 0.622775757902} H21 36 1 6 {} {0.585301719281 0.342158561318 0.309191138167} C4 37 1 14 {} {0.58066250409 0.375484833506 0.426248084734} Si6 38 1 14 {} {0.569355839985 0.253074580435 0.291243521281} Si7 39 1 8 {} {0.609302857093 0.326581241478 0.494214685878} O5 40 1 8 {} {0.603138199063 0.450738128658 0.431111888729} O6 41 1 6 {} {0.521631268943 0.383570102153 0.463065535292} C5 42 1 6 {} {0.508456548553 0.242426695818 0.267645175027} C6 43 1 8 {} {0.584642522771 0.214431269096 0.385490160886} O7 44 1 8 {} {0.599073155339 0.216049333829 0.211397331793} O8 45 1 14 {} {0.646886524886 0.495483477502 0.459779209135} Si8 46 1 7 {} {0.631367219239 0.576532335926 0.486867665751} N4 47 1 14 {} {0.63795396572 0.604290839736 0.597264221149} Si9 48 1 14 {} {0.607460096592 0.630241836572 0.40801182245} Si10 49 1 7 {} {0.618624649513 0.610953738021 0.297970742678} N5 50 1 7 {} {0.690569463658 0.6240398899 0.633643367222} N6 51 1 1 {} {0.565883971586 0.373887147278 0.263201946016} H22 52 1 1 {} {0.620620774936 0.347258059397 0.289578943993} H23 53 1 1 {} {0.607612706166 0.279446829051 0.476683770691} H24 54 1 1 {} {0.502745170429 0.416242872581 0.418159132996} H25 55 1 1 {} {0.520104511133 0.405693897786 0.530114367195} H26 56 1 1 {} {0.504548603089 0.334970867723 0.465300883465} H27 57 1 1 {} {0.499143244544 0.189310118298 0.26301011952} H28 58 1 1 {} {0.49919015643 0.266564695564 0.204271827177} H29 59 1 1 {} {0.488031696263 0.265290582496 0.320408241681} H30 60 1 1 {} {0.587337488946 0.16607162058 0.383254752216} H31 61 1 1 {} {0.585867193546 0.212024233393 0.152636009338} H32 62 1 1 {} {0.668914189034 0.466790150639 0.54046072393} H33 63 1 1 {} {0.678609928151 0.49516074543 0.383127931307} H34 64 1 1 {} {0.610356035573 0.666319264763 0.603837076274} H35 65 1 1 {} {0.621506315608 0.551304146234 0.658863690728} H36 66 1 1 {} {0.557703742973 0.629466517408 0.415460601758} H37 67 1 1 {} {0.624438504221 0.699115124816 0.425874671162} H38 68 1 1 {} {0.602223265726 0.572582540035 0.268186742671} H39 69 1 1 {} {0.650124352262 0.614543275672 0.273972940582} H40 70 1 1 {} {0.712067312936 0.586804660569 0.651432966078} H41 71 1 1 {} {0.707634096323 0.663215102902 0.606333309957} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end