iterations/neb0_image05_iter20.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image05 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.356624437063 0.540530326495 0.422734735521} C1 1 1 14 {} {0.337589668116 0.507439369562 0.533795354816} Si1 2 1 14 {} {0.411577158704 0.583324812756 0.418282144384} Si2 3 1 8 {} {0.340903998563 0.567704413496 0.609008269783} O1 4 1 8 {} {0.284699907005 0.485564785239 0.525787764302} O2 5 1 6 {} {0.369290119409 0.431488727417 0.569168916513} C2 6 1 6 {} {0.460605235535 0.526109848847 0.411975649299} C3 7 1 8 {} {0.413448813554 0.627133591133 0.513868207872} O3 8 1 8 {} {0.411999907628 0.634061117017 0.33028067336} O4 9 1 14 {} {0.232322167031 0.49105969081 0.556414180897} Si3 10 1 7 {} {0.212761286837 0.412349335912 0.587892080672} N1 11 1 14 {} {0.176731069404 0.408066863101 0.679755168846} Si4 12 1 14 {} {0.228358129462 0.342370931885 0.523887099964} Si5 13 1 7 {} {0.229543008572 0.354859745276 0.410309387406} N2 14 1 7 {} {0.129222571407 0.456394056295 0.672592378324} N3 15 1 1 {} {0.356284461274 0.500078915839 0.372706911371} H1 16 1 1 {} {0.33162895139 0.577550356773 0.400704022118} H2 17 1 1 {} {0.364689105786 0.59987786227 0.595942070416} H3 18 1 1 {} {0.365964033273 0.390463387931 0.520702645105} H4 19 1 1 {} {0.356630673037 0.413406299408 0.633682903735} H5 20 1 1 {} {0.405002631646 0.442450917727 0.577430870237} H6 21 1 1 {} {0.492606771749 0.553053075566 0.411586559354} H7 22 1 1 {} {0.459154071068 0.495089992649 0.35140481873} H8 23 1 1 {} {0.461177807922 0.492326472002 0.469603828602} H9 24 1 1 {} {0.438765972636 0.656396965385 0.523876372293} H10 25 1 1 {} {0.440583629356 0.642392665451 0.302055043343} H11 26 1 1 {} {0.226611542515 0.536753324512 0.634417029529} H12 27 1 1 {} {0.206858069738 0.517677522683 0.478624877059} H13 28 1 1 {} {0.163862957734 0.336345383482 0.687930655014} H14 29 1 1 {} {0.199800149832 0.432421155115 0.76164570913} H15 30 1 1 {} {0.274288755429 0.320646160969 0.548762986654} H16 31 1 1 {} {0.19523000735 0.288940284093 0.544209781981} H17 32 1 1 {} {0.256016567798 0.378748179955 0.382323066554} H18 33 1 1 {} {0.201070424734 0.36544955547 0.376286531546} H19 34 1 1 {} {0.129043388009 0.504013828558 0.696284686776} H20 35 1 1 {} {0.106564820198 0.450399604447 0.622832034165} H21 36 1 6 {} {0.58530674295 0.342217277605 0.309153949079} C4 37 1 14 {} {0.580815022309 0.375370169136 0.426293995252} Si6 38 1 14 {} {0.5693345044 0.253136812359 0.291229376415} Si7 39 1 8 {} {0.609516264213 0.326518661476 0.494268171203} O5 40 1 8 {} {0.603093879173 0.450793125523 0.431086735119} O6 41 1 6 {} {0.521711446314 0.383181409017 0.463143506028} C5 42 1 6 {} {0.508441923616 0.242490246378 0.267660708519} C6 43 1 8 {} {0.584630410185 0.214507547081 0.38548258171} O7 44 1 8 {} {0.599048805015 0.216133710093 0.211361371225} O8 45 1 14 {} {0.646862146533 0.495485787183 0.459822043186} Si8 46 1 7 {} {0.631324430234 0.576587875525 0.486763367729} N4 47 1 14 {} {0.637895825965 0.604352322955 0.597329641735} Si9 48 1 14 {} {0.607412952619 0.630248661387 0.407966086827} Si10 49 1 7 {} {0.618573297808 0.610870898012 0.298354057816} N5 50 1 7 {} {0.690709885186 0.624225328399 0.633863010104} N6 51 1 1 {} {0.565863304289 0.373974265148 0.263226133095} H22 52 1 1 {} {0.620607319514 0.347326278205 0.289537284483} H23 53 1 1 {} {0.607627428504 0.279459393124 0.476711622874} H24 54 1 1 {} {0.503000935465 0.415749783833 0.41781013783} H25 55 1 1 {} {0.520142582391 0.405594437443 0.530245865903} H26 56 1 1 {} {0.504637119807 0.334489162491 0.465531401374} H27 57 1 1 {} {0.499149479604 0.189355929543 0.263039995171} H28 58 1 1 {} {0.499143056274 0.266610696786 0.204288743396} H29 59 1 1 {} {0.488011542369 0.26532326691 0.320451053469} H30 60 1 1 {} {0.58735031389 0.166184244941 0.383220824348} H31 61 1 1 {} {0.585858737491 0.212098472156 0.152655555486} H32 62 1 1 {} {0.668887635654 0.466868965849 0.540405370619} H33 63 1 1 {} {0.678572487774 0.495227040394 0.383065372935} H34 64 1 1 {} {0.610343408122 0.666302953114 0.603685955188} H35 65 1 1 {} {0.621481345348 0.551355054399 0.658653529403} H36 66 1 1 {} {0.557649186087 0.629577055103 0.41541019395} H37 67 1 1 {} {0.624397290436 0.69915555675 0.425745967781} H38 68 1 1 {} {0.602142177407 0.572664941347 0.268077888181} H39 69 1 1 {} {0.650147968376 0.614608863948 0.273916607359} H40 70 1 1 {} {0.712031498737 0.58691006742 0.651413152796} H41 71 1 1 {} {0.707597331192 0.663230521255 0.606449630469} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end