iterations/neb0_image05_iter25.sci output for 43: 3.6A-->1.6A 715(amd-3) Si-CH2H...H2HC-Si two dimer closed (TSS)
Status: finished#MD System 2.0 @Title neb0_image05 @Columns AsymmetricAtom AtomicNumber int 0 Connections string {{}} Fractional double {{0.0 0.0 0.0}} Name string {{}} Site int 1 WyckoffPosition int -1 @end @data 6 {} {0.356608978155 0.540546530555 0.422722904718} C1 1 1 14 {} {0.337631688342 0.507432066338 0.533786494423} Si1 2 1 14 {} {0.411587482312 0.583406090469 0.418225472259} Si2 3 1 8 {} {0.340920050448 0.567708919591 0.609036864733} O1 4 1 8 {} {0.284661631055 0.485529702057 0.525794698705} O2 5 1 6 {} {0.369287109665 0.431455361562 0.569166948857} C2 6 1 6 {} {0.460577311932 0.526164355798 0.411945789875} C3 7 1 8 {} {0.413414260913 0.627213148196 0.513820893952} O3 8 1 8 {} {0.411968537878 0.634163804955 0.330290400613} O4 9 1 14 {} {0.232361282432 0.491060107806 0.556382430595} Si3 10 1 7 {} {0.212766628186 0.412323794407 0.587892096193} N1 11 1 14 {} {0.176750322425 0.408046700295 0.679786406046} Si4 12 1 14 {} {0.228367683098 0.342340789747 0.523885823321} Si5 13 1 7 {} {0.229559559556 0.354849970613 0.410319054955} N2 14 1 7 {} {0.129242143127 0.45638270593 0.672618629332} N3 15 1 1 {} {0.356307820311 0.500078524165 0.372708227403} H1 16 1 1 {} {0.331563072463 0.577512030421 0.400688501603} H2 17 1 1 {} {0.364688291188 0.599831701523 0.595948026981} H3 18 1 1 {} {0.365972147354 0.390432678075 0.520708546931} H4 19 1 1 {} {0.356643168635 0.41338116017 0.633683297107} H5 20 1 1 {} {0.40500853514 0.442427938228 0.577426125661} H6 21 1 1 {} {0.492615328802 0.553200459601 0.411554510943} H7 22 1 1 {} {0.459103328964 0.49514391653 0.351324664918} H8 23 1 1 {} {0.461082631217 0.492374269217 0.469767040246} H9 24 1 1 {} {0.438760676241 0.656389851065 0.523895417104} H10 25 1 1 {} {0.440534231294 0.642393042353 0.302094367003} H11 26 1 1 {} {0.226612434679 0.536724462105 0.634406943965} H12 27 1 1 {} {0.20686552241 0.517642445988 0.478639526731} H13 28 1 1 {} {0.163876312986 0.336328887559 0.68795013582} H14 29 1 1 {} {0.199812291213 0.432402746491 0.761635965081} H15 30 1 1 {} {0.274297197626 0.320619467289 0.548745951558} H16 31 1 1 {} {0.195241263788 0.288915328013 0.544205434281} H17 32 1 1 {} {0.256012538731 0.378720192521 0.382318687032} H18 33 1 1 {} {0.201076375613 0.365440605075 0.376277635221} H19 34 1 1 {} {0.12905711873 0.503988213216 0.696272777016} H20 35 1 1 {} {0.106570891546 0.450375596866 0.622836666163} H21 36 1 6 {} {0.585320080684 0.342200461095 0.309139839434} C4 37 1 14 {} {0.580818490534 0.375360798616 0.426360626784} Si6 38 1 14 {} {0.569327835054 0.25316817904 0.291216173434} Si7 39 1 8 {} {0.609661052335 0.326506514528 0.494268203094} O5 40 1 8 {} {0.603062182216 0.450716167879 0.431101565394} O6 41 1 6 {} {0.521692128849 0.383106681189 0.463233725031} C5 42 1 6 {} {0.508426391166 0.242501574646 0.267667296623} C6 43 1 8 {} {0.584625270479 0.214558047559 0.385496150138} O7 44 1 8 {} {0.59905473993 0.216161233654 0.211377748008} O8 45 1 14 {} {0.646867559963 0.495592409554 0.45974458905} Si8 46 1 7 {} {0.631327842974 0.576625488295 0.486831945251} N4 47 1 14 {} {0.63791846506 0.604376373284 0.597216827146} Si9 48 1 14 {} {0.607401366281 0.630282334394 0.407940910657} Si10 49 1 7 {} {0.618601033274 0.610886504328 0.298359990433} N5 50 1 7 {} {0.690691008767 0.624233852351 0.633912688206} N6 51 1 1 {} {0.565860092693 0.374015719376 0.263279921902} H22 52 1 1 {} {0.620630228005 0.347348979063 0.289467982237} H23 53 1 1 {} {0.607658599338 0.279378029315 0.47673984508} H24 54 1 1 {} {0.503011867 0.415647885499 0.417632261501} H25 55 1 1 {} {0.520158199425 0.405465300895 0.530181212865} H26 56 1 1 {} {0.504738808693 0.334354528634 0.465669910521} H27 57 1 1 {} {0.499155008454 0.189377242577 0.263050327057} H28 58 1 1 {} {0.499126436992 0.266629730187 0.204303952692} H29 59 1 1 {} {0.48800753473 0.265338242682 0.320459747852} H30 60 1 1 {} {0.58735788258 0.166199515194 0.3832096674} H31 61 1 1 {} {0.585845287798 0.212122337201 0.152614588471} H32 62 1 1 {} {0.668888278286 0.466865131681 0.540431741298} H33 63 1 1 {} {0.678548197736 0.495233776512 0.383079999702} H34 64 1 1 {} {0.610325784553 0.666363442272 0.603650785235} H35 65 1 1 {} {0.621460567465 0.55130332565 0.658694318589} H36 66 1 1 {} {0.557636329344 0.629607601867 0.415415770688} H37 67 1 1 {} {0.624376138427 0.69914356372 0.425724200399} H38 68 1 1 {} {0.602075422616 0.572642896889 0.268011197262} H39 69 1 1 {} {0.650140011364 0.614637735638 0.273947616869} H40 70 1 1 {} {0.712023307203 0.58698077675 0.651393284356} H41 71 1 1 {} {0.707606675239 0.663246365453 0.606496338418} H42 72 1 @end @Columns Cell Constraints string {a b c A B G} Origin int {{0 0 0}} Parameters double {{10.0 10.0 10.0 90.0 90.0 90.0}} PrimitiveData double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} RotationMatrix double {{{1.0 0.0 0.0} {0.0 1.0 0.0} {0.0 0.0 1.0}}} SpaceGroup string P1 SpaceGroupNumber int 1 ToCartesians double {{{10.0 0.0 0.0} {0.0 10.0 0.0} {0.0 0.0 10.0}}} ToFractionals double {{{0.10000000000000001 0.0 0.0} {0.0 0.10000000000000001 0.0} {0.0 0.0 0.10000000000000001}}} @end @data {a b c A B G} {0 0 0} {30 20 15 90 90 90} {{1 0 0} {0 1 0} {0 0 1}} {{1 0 0} {0 1 0} {0 0 1}} P1 1 {{30 0 0} {0 20 0} {0 0 15}} {{0.0333333333333 0 0} {0 0.05 0} {0 0 0.0666666666667}} @end @Columns AsymmetricBond Atom1 reference AsymmetricAtom Atom2 reference AsymmetricAtom Key int 0 Order int 0 @end @data 56 41 0 0 50 47 0 0 2 0 0 0 58 42 0 0 44 38 0 0 70 50 0 0 69 49 0 0 34 14 0 0 48 46 0 0 52 36 0 0 6 2 0 0 49 48 0 0 62 45 0 0 21 6 0 0 7 2 0 0 22 6 0 0 8 2 0 0 27 9 0 0 33 13 0 0 37 36 0 0 23 6 0 0 59 42 0 0 12 10 0 0 54 41 0 0 51 36 0 0 61 44 0 0 16 0 0 0 19 5 0 0 20 5 0 0 13 12 0 0 1 0 0 0 43 38 0 0 10 9 0 0 68 49 0 0 53 39 0 0 3 1 0 0 47 46 0 0 60 43 0 0 4 1 0 0 18 5 0 0 5 1 0 0 67 48 0 0 26 9 0 0 32 13 0 0 46 45 0 0 17 3 0 0 11 10 0 0 9 4 0 0 15 0 0 0 25 8 0 0 31 12 0 0 42 38 0 0 64 47 0 0 24 7 0 0 29 11 0 0 40 37 0 0 39 37 0 0 41 37 0 0 66 48 0 0 57 42 0 0 38 36 0 0 65 47 0 0 30 12 0 0 28 11 0 0 71 50 0 0 45 40 0 0 35 14 0 0 55 41 0 0 14 11 0 0 63 45 0 0 @end @Columns Bond AsymmetricBond reference AsymmetricBond Atom1 reference Atom Atom2 reference Atom CellOffset2 int {{0 0 0}} Key int 0 @end @data 0 56 41 {0 0 0} 0 1 47 50 {0 0 0} 0 2 0 2 {0 0 0} 0 3 58 42 {0 0 0} 0 4 38 44 {0 0 0} 0 5 50 70 {0 0 0} 0 6 49 69 {0 0 0} 0 7 14 34 {0 0 0} 0 8 46 48 {0 0 0} 0 9 36 52 {0 0 0} 0 10 2 6 {0 0 0} 0 11 48 49 {0 0 0} 0 12 45 62 {0 0 0} 0 13 21 6 {0 0 0} 0 14 7 2 {0 0 0} 0 15 22 6 {0 0 0} 0 16 8 2 {0 0 0} 0 17 9 27 {0 0 0} 0 18 13 33 {0 0 0} 0 19 36 37 {0 0 0} 0 20 23 6 {0 0 0} 0 21 59 42 {0 0 0} 0 22 10 12 {0 0 0} 0 23 41 54 {0 0 0} 0 24 51 36 {0 0 0} 0 25 44 61 {0 0 0} 0 26 0 16 {0 0 0} 0 27 5 19 {0 0 0} 0 28 5 20 {0 0 0} 0 29 12 13 {0 0 0} 0 30 0 1 {0 0 0} 0 31 38 43 {0 0 0} 0 32 10 9 {0 0 0} 0 33 49 68 {0 0 0} 0 34 39 53 {0 0 0} 0 35 3 1 {0 0 0} 0 36 46 47 {0 0 0} 0 37 43 60 {0 0 0} 0 38 4 1 {0 0 0} 0 39 18 5 {0 0 0} 0 40 1 5 {0 0 0} 0 41 48 67 {0 0 0} 0 42 9 26 {0 0 0} 0 43 13 32 {0 0 0} 0 44 45 46 {0 0 0} 0 45 3 17 {0 0 0} 0 46 10 11 {0 0 0} 0 47 4 9 {0 0 0} 0 48 15 0 {0 0 0} 0 49 8 25 {0 0 0} 0 50 12 31 {0 0 0} 0 51 38 42 {0 0 0} 0 52 64 47 {0 0 0} 0 53 7 24 {0 0 0} 0 54 11 29 {0 0 0} 0 55 40 37 {0 0 0} 0 56 39 37 {0 0 0} 0 57 37 41 {0 0 0} 0 58 66 48 {0 0 0} 0 59 42 57 {0 0 0} 0 60 38 36 {0 0 0} 0 61 65 47 {0 0 0} 0 62 30 12 {0 0 0} 0 63 28 11 {0 0 0} 0 64 50 71 {0 0 0} 0 65 45 40 {0 0 0} 0 66 14 35 {0 0 0} 0 67 55 41 {0 0 0} 0 68 11 14 {0 0 0} 0 69 63 45 {0 0 0} 0 @end @Columns Subset Color string {{#65d9f0}} Criteria string {{}} DisplayLine int 0 IeqJ int 1 IgtJ int 0 IltJ int 0 Length int 1 Name string {{}} Table string {{}} Type string atom UseColor int 0 @end @data @end